PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67655.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 280aa    MW: 31276.1 Da    PI: 7.9373
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.32.8e-20152186135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  PON67655.1 152 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 186
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MHRCSSSQGN MVGPCSCGLF HSQSNSFSML FSMPNHKPFD HYNHDQSHHD MYSYTSPSSV  60
DCTLSLGTPS TRLSTTTTED YYDEYSSKNS QRSMRHERRN DSCVSNFCWD LLQSNTNSTK  120
QQTTSHKNAG RNGGNSSTTN NNSNDSLLAR RCANCDTTST PLWRNGPRGP KSLCNACGIR  180
FKKEERRAAA TSTANGAASG VVIEPSHVFG HHNNPWTNIH HHQYSQAQKM PCFSPAIGNE  240
FRFVDDENHE PAVADSTGIS FLSWRLNVTD RPSLVHDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.14e-44GATA family protein