PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON67348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | NAC | ||||||||
Protein Properties | Length: 369aa MW: 41665.7 Da PI: 7.43 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175 | 2.2e-54 | 16 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL kkv ++++ + ++i evd++k+ePw+Lp k+k eke+yfF+ rd+ky+tg r+nrat++gyWkatgkd+e+++ +++l PON67348.1 16 LPPGFRFHPTDEELISHYLYKKVVSTNFCC-RAIGEVDLNKSEPWELPWKAKMVEKECYFFCVRDRKYPTGLRTNRATEAGYWKATGKDREIYR-GKSL 112 79*************************999.89***************88888999**************************************.999* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrapkgek++Wvmheyrle PON67348.1 113 VGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 142 ****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MENVLSQVKE DEQLDLPPGF RFHPTDEELI SHYLYKKVVS TNFCCRAIGE VDLNKSEPWE 60 LPWKAKMVEK ECYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDREIYRGK SLVGMKKTLV 120 FYKGRAPKGE KSNWVMHEYR LEGKFSIHNL PKTAKNEWVI CRVFQKSSGG KKIPITGLNR 180 LTPFSNEKGS FGLPPLMDSS SPYSTKSKPV VPQSVNVPCF SNPMNVQRNQ DETMVDSITN 240 SLYGAVSNTN VIPTATTTIP LLSSLYSAQN GVVSSSSASA SMQFPSNSVM VHQNSGNDQS 300 ILRALLENNG SNLRQSFKTE RDNTEISSVM ANLEMGRRQF GDQALPHADI ESFWNYXGEE 360 EQEEEEECI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-130 | NAC family protein |