PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON67347.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 371aa MW: 41100.6 Da PI: 6.3737

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON67347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.5e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+ +++q+G g+W+ +++ g+ R++k+c++rw +yl PON67347.1 16 RGPWTPEEDQKLLSYIQQHGHGSWRFLPQKAGLQRCGKSCRLRWTNYL 63 89********************************************97 PP
2	Myb_DNA-binding	52.7	1e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E+ +++++++lG++ W++Ia +++ +Rt++++k++w+++l PON67347.1 69 RGKFTLQEERTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 114 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MGRSPFCDNY ADGLKRGPWT PEEDQKLLSY IQQHGHGSWR FLPQKAGLQR CGKSCRLRWT 60 NYLRPDIKRG KFTLQEERTI IQLHALLGNR WSAIATHLPK RTDNEIKNYW NTHLKKRLTT 120 MGIDPVTHKP QRNTLGSVAA DPKDVSNLSH MAQWESTRLE AEARLVRESK LLHSQGGVNV 180 DESGSNGSSN NMATSSDEIL KKMPTTFAPP RWFDILKAWE SRLILSESAR GNDHDRTFKL 240 SVSTGGSDAN GGDHVLADSV AASFGSGGNS DVISYLTAPS SGANGGSPLG FDGIFDTWSG 300 ISGCDDFCSE EVLATRDLED NYDHRAPCDD HDIGNLVQSG GYDELYNEVN KNYWNDIVNL 360 VNCGPSNLPV F

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MGRSPFCDNY ADGLKRGPWT PEEDQKLLSY IQQHGHGSWR FLPQKAGLQR CGKSCRLRWT  60
NYLRPDIKRG KFTLQEERTI IQLHALLGNR WSAIATHLPK RTDNEIKNYW NTHLKKRLTT  120
MGIDPVTHKP QRNTLGSVAA DPKDVSNLSH MAQWESTRLE AEARLVRESK LLHSQGGVNV  180
DESGSNGSSN NMATSSDEIL KKMPTTFAPP RWFDILKAWE SRLILSESAR GNDHDRTFKL  240
SVSTGGSDAN GGDHVLADSV AASFGSGGNS DVISYLTAPS SGANGGSPLG FDGIFDTWSG  300
ISGCDDFCSE EVLATRDLED NYDHRAPCDD HDIGNLVQSG GYDELYNEVN KNYWNDIVNL  360
VNCGPSNLPV F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	2e-99	MYB family protein