PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON67346.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 396aa MW: 43543.8 Da PI: 8.1188

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON67346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.7	2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++q+G g W+ +++ g+ R++k+c++rw +yl PON67346.1 14 KGAWTPEEDQKLLSYIQQHGEGGWRFLPQKAGLMRCGKSCRLRWANYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.1	1.8e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++ ++++++ lG++ W+tIa+ ++ +Rt++++k++w++ PON67346.1 67 RGEFSPEEEQTIIKLHAVLGNR-WSTIAKNLP-RRTDNEIKNHWNT 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MGRAPCCNVL GLRKGAWTPE EDQKLLSYIQ QHGEGGWRFL PQKAGLMRCG KSCRLRWANY 60 LRPDIKRGEF SPEEEQTIIK LHAVLGNRWS TIAKNLPRRT DNEIKNHWNT RLKKRLIEMG 120 KYLDHDHPNE SRPCSTITTT QLVNNPIDQP KAQRSTNDST TTTTSAHLLN EIAASTKLKL 180 SNCLASFLAR HGGGGGDKRV AVSNSASVLN MVATTYRKPK SHACLIDAVK EVLSKSSQAC 240 SEEIDHGNEN VIANSSNADN SSCSISISDL EISNNNSSDM GSPSPKSKNG QESRYVHSAT 300 SPRAVVLNGI ASKLALVKRC RSTLLSSTDW RASSHVSSSE FVDDSHDAAG SAVLMPVSPS 360 SDERFLFQDM GFDPLELFFE GIVSATDEFD TNTFSW

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MGRAPCCNVL GLRKGAWTPE EDQKLLSYIQ QHGEGGWRFL PQKAGLMRCG KSCRLRWANY  60
LRPDIKRGEF SPEEEQTIIK LHAVLGNRWS TIAKNLPRRT DNEIKNHWNT RLKKRLIEMG  120
KYLDHDHPNE SRPCSTITTT QLVNNPIDQP KAQRSTNDST TTTTSAHLLN EIAASTKLKL  180
SNCLASFLAR HGGGGGDKRV AVSNSASVLN MVATTYRKPK SHACLIDAVK EVLSKSSQAC  240
SEEIDHGNEN VIANSSNADN SSCSISISDL EISNNNSSDM GSPSPKSKNG QESRYVHSAT  300
SPRAVVLNGI ASKLALVKRC RSTLLSSTDW RASSHVSSSE FVDDSHDAAG SAVLMPVSPS  360
SDERFLFQDM GFDPLELFFE GIVSATDEFD TNTFSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	4e-68	MYB family protein