PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON67208.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 305aa MW: 32465.7 Da PI: 8.1268

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON67208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.4	4.4e-20	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G+++W++I++ ++ gR++k+c++rw + PON67208.1 12 KGPWSPEEDEALQKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	33.4	1.1e-10	66	97	3	36
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRt 36 ++T+eEde +++a++++G++ W+tIar ++ +++ PON67208.1 66 AFTPEEDETIIRAHARFGNK-WATIARLLN-RKC 97 79****************.******9.777 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MAVSRKEMDR IKGPWSPEED EALQKLVQKH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 QVEHRAFTPE EDETIIRAHA RFGNKWATIA RLLNRKCSTM FEDCDDGLGG GGYDGNYPQP 120 LKRSVSAGSA LPVSTGLYMN PGSPSGSDVS DSSVPHAAVS PSHVYRPVAR AGAVFPPVET 180 ASSSNDPATS LSLSLPGVDS CEVSNRVAES IQNSSSSPAT AVMNLLPAIA PAPAPSPPAS 240 GGEGENGVFV PFSKELLAVM QEMIRKEVRS YMAGLEQNGA CLPPRGAVDG FRNVAVKRIG 300 ISKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	5e-78	MYB family protein