PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67149.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 411aa    MW: 44338.5 Da    PI: 4.7367
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67149.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.47.9e-16158204455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  PON67149.1 158 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 204
                 6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MGDMYEKNIC SSSAPDEISL FLQQILVRPS SSSSDSPLSS AAAAAAAMRA QFSVSSPAMV  60
GPCGGSNASQ DNLSRLCRSQ MVGDGIAAID SSGALFLANT SGVAATTNVS SSSVGASENE  120
NDEYDCESEE GLEALVEEVP SKTVIGRGST KRSRAAEVHN LSEKRRRSRI NEKMKALQNL  180
IPNSNKTDKA SMLDEAIEYL KQLQLQVQIL AMRNGLSLHP VSLPGAVQPA QLSQMRMDFG  240
EENRSLHLNM RGIFPVNQET STQSLFSLPN QCTSSNQQLV PDMLNIINSE TTLGLDSQVQ  300
GHLGAFQLQT SAPEISKENR IQHQQTNLNR SETSPLEFEM GAMANVASFN RQASDIKGND  360
SLETCTIEGD WSEGGLLKAI EQSLLLPSHL NSMRTGRSAE NENIKIERAN L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-47bHLH family protein