PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON66958.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 292aa MW: 32895.8 Da PI: 5.3719 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.8 | 8e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd++l+ +v+++G +W+ ++ g+ R++k+c++rw +yl PON66958.1 14 RGAWSSEEDDKLKAYVERYGHWNWRELPKFAGLSRCGKSCRLRWMNYL 61 89******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 58 | 2.2e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+ l++++++++G++ W+ Ia++++ gRt++++k++w+++l PON66958.1 67 RGSYTAEEESLIIKLHEEHGNK-WSMIAAKLP-GRTDNEIKNHWHTHL 112 8999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MVRAPFYDKY GVKRGAWSSE EDDKLKAYVE RYGHWNWREL PKFAGLSRCG KSCRLRWMNY 60 LRPDVKRGSY TAEEESLIIK LHEEHGNKWS MIAAKLPGRT DNEIKNHWHT HLKKRSKLTH 120 HDHDHDQKPT KFQTKDLYSS EYSSGGDRNS HGESEAQSSS STTAPPDIAG LSPQILESSQ 180 YSPTETTSST STGSSSSTSS SSTSGAPEEL VSTTNSTDDV AEDSTTHHDP SKLEALSIQE 240 QYCGGDFWTE PFLEDNNVMS IQNEYYPACF AEEGILSSYN LSFYDGGMDY LL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-56 | MYB family protein |