PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66249.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Nin-like

Protein Properties

Length: 673aa MW: 74570.9 Da PI: 6.7521

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.3	1.5e-28	347	397	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl +l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ PON66249.1 347 EKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 397 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MPITLQAVDL RSFQNFSPPA VKVCDELYQA ALSEIVEVLV SVCKIHRLPL ALTWAPCHQQ 60 GKGGCRHSDE NYTRCVSTVD LACFVSNLEI LGFHEACSEH HLFRGQGIVG TAFTTNKPCF 120 ATDITAFSKT EYPLSHHARM FGLRAAVAIP LRSVYTSSSD FVLEFFLPKD CQDPEEQKQM 180 LNSLSIVIQQ ACRSLHVVEK ELEEEQIMLP NGDPAIVASS EGGLKLGTPT TATTTNTTTC 240 PVGDQSSGKE SSWVAHMMEA QQQGRGVSVS LDYLTEEPKE EFRVTTHWDN LNHGDLSNGQ 300 VFSDFGQLQQ CSGSNGSIEG GIDSYSFGGR RSSGARKAGE KRRTKTEKTI SLPVLRQYFA 360 GSLKDAAKSI GVCPTTLKRI CRQHGITRWP SRKIKKVGHS LRKLQLVIDS VQGAEGAIQI 420 GSFYSSFPQL NSPKFQGNSN DSFSSISPSD HHHHHHHLNN QSNSQPESGF FIHGSAMKSS 480 PSMSSQASGL QQSTTTFSCF NGDPLITEDP SVILKRACSS DEELFASNQD KANLLSRSQS 540 YKALSDQNRI LDQTLLPLPD NNERINLTDG FAFRVKANFG EKKIRFSLPP KCSFRDLQLE 600 IMRRFALDDI TMIDIKYLDD DREWVLLTCN ADLQECLEIH RQSQNRTMRI CLQQAPSDQL 660 IEESPFGSSS SPC

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MPITLQAVDL RSFQNFSPPA VKVCDELYQA ALSEIVEVLV SVCKIHRLPL ALTWAPCHQQ  60
GKGGCRHSDE NYTRCVSTVD LACFVSNLEI LGFHEACSEH HLFRGQGIVG TAFTTNKPCF  120
ATDITAFSKT EYPLSHHARM FGLRAAVAIP LRSVYTSSSD FVLEFFLPKD CQDPEEQKQM  180
LNSLSIVIQQ ACRSLHVVEK ELEEEQIMLP NGDPAIVASS EGGLKLGTPT TATTTNTTTC  240
PVGDQSSGKE SSWVAHMMEA QQQGRGVSVS LDYLTEEPKE EFRVTTHWDN LNHGDLSNGQ  300
VFSDFGQLQQ CSGSNGSIEG GIDSYSFGGR RSSGARKAGE KRRTKTEKTI SLPVLRQYFA  360
GSLKDAAKSI GVCPTTLKRI CRQHGITRWP SRKIKKVGHS LRKLQLVIDS VQGAEGAIQI  420
GSFYSSFPQL NSPKFQGNSN DSFSSISPSD HHHHHHHLNN QSNSQPESGF FIHGSAMKSS  480
PSMSSQASGL QQSTTTFSCF NGDPLITEDP SVILKRACSS DEELFASNQD KANLLSRSQS  540
YKALSDQNRI LDQTLLPLPD NNERINLTDG FAFRVKANFG EKKIRFSLPP KCSFRDLQLE  600
IMRRFALDDI TMIDIKYLDD DREWVLLTCN ADLQECLEIH RQSQNRTMRI CLQQAPSDQL  660
IEESPFGSSS SPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17150.1	1e-168	Nin-like family protein