PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66248.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Nin-like

Protein Properties

Length: 967aa MW: 107753 Da PI: 6.1576

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.7	2.4e-28	641	691	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl +l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ PON66248.1 641 EKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 691 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 967 aa Download sequence
MEYGAMMPSN AYGTSFSDAT MEVDFMDQLL LEGCWDPAVA AAATGLNFTQ PAAPCSSAPR 60 SLIETSHYMP SFESSNTSTA HLITTHHHQI YQDHQETEEG GSDHLQENHS SESNNNNFFM 120 NEANEVGKRL WIGPRPNPGT GPCSSVKERL TLAIDYLKEC TRDRDVLIQI WVPIRRGGRQ 180 ILTTYDQPYS LDPNCKSLAS YRMVSREYQF LCEEDSAESV GLPSQAFLGK LPEWTPDVRY 240 FRSYEYPRIN YAKQYNVRGS LALPIFERGN GTCLGVVEIV MTTQKVNYRP EIEYVCQALE 300 AVDLRSFQNF SPPAVKVCDE LYQAALSEIV EVLVSVCKIH RLPLALTWAP CHQQGKGGCR 360 HSDENYTRCV STVDLACFVS NLEILGFHEA CSEHHLFRGQ GIVGTAFTTN KPCFATDITA 420 FSKTEYPLSH HARMFGLRAA VAIPLRSVYT SSSDFVLEFF LPKDCQDPEE QKQMLNSLSI 480 VIQQACRSLH VVEKELEEEQ IMLPNGDPAI VASSEGGLKL GTPTTATTTN TTTCPVGDQS 540 SGKESSWVAH MMEAQQQGRG VSVSLDYLTE EPKEEFRVTT HWDNLNHGDL SNGQVFSDFG 600 QLQQCSGSNG SIEGGIDSYS FGGRRSSGAR KAGEKRRTKT EKTISLPVLR QYFAGSLKDA 660 AKSIGVCPTT LKRICRQHGI TRWPSRKIKK VGHSLRKLQL VIDSVQGAEG AIQIGSFYSS 720 FPQLNSPKFQ GNSNDSFSSI SPSDHHHHHH HLNNQSNSQP ESGFFIHGSA MKSSPSMSSQ 780 ASGLQQSTTT FSCFNGDPLI TEDPSVILKR ACSSDEELFA SNQDKANLLS RSQSYKALSD 840 QNRILDQTLL PLPDNNERIN LTDGFAFRVK ANFGEKKIRF SLPPKCSFRD LQLEIMRRFA 900 LDDITMIDIK YLDDDREWVL LTCNADLQEC LEIHRQSQNR TMRICLQQAP SDQLIEESPF 960 GSSSSPC

Sequence ? help Back to Top

Protein Sequence Length: 967 aa Download sequence

MEYGAMMPSN AYGTSFSDAT MEVDFMDQLL LEGCWDPAVA AAATGLNFTQ PAAPCSSAPR  60
SLIETSHYMP SFESSNTSTA HLITTHHHQI YQDHQETEEG GSDHLQENHS SESNNNNFFM  120
NEANEVGKRL WIGPRPNPGT GPCSSVKERL TLAIDYLKEC TRDRDVLIQI WVPIRRGGRQ  180
ILTTYDQPYS LDPNCKSLAS YRMVSREYQF LCEEDSAESV GLPSQAFLGK LPEWTPDVRY  240
FRSYEYPRIN YAKQYNVRGS LALPIFERGN GTCLGVVEIV MTTQKVNYRP EIEYVCQALE  300
AVDLRSFQNF SPPAVKVCDE LYQAALSEIV EVLVSVCKIH RLPLALTWAP CHQQGKGGCR  360
HSDENYTRCV STVDLACFVS NLEILGFHEA CSEHHLFRGQ GIVGTAFTTN KPCFATDITA  420
FSKTEYPLSH HARMFGLRAA VAIPLRSVYT SSSDFVLEFF LPKDCQDPEE QKQMLNSLSI  480
VIQQACRSLH VVEKELEEEQ IMLPNGDPAI VASSEGGLKL GTPTTATTTN TTTCPVGDQS  540
SGKESSWVAH MMEAQQQGRG VSVSLDYLTE EPKEEFRVTT HWDNLNHGDL SNGQVFSDFG  600
QLQQCSGSNG SIEGGIDSYS FGGRRSSGAR KAGEKRRTKT EKTISLPVLR QYFAGSLKDA  660
AKSIGVCPTT LKRICRQHGI TRWPSRKIKK VGHSLRKLQL VIDSVQGAEG AIQIGSFYSS  720
FPQLNSPKFQ GNSNDSFSSI SPSDHHHHHH HLNNQSNSQP ESGFFIHGSA MKSSPSMSSQ  780
ASGLQQSTTT FSCFNGDPLI TEDPSVILKR ACSSDEELFA SNQDKANLLS RSQSYKALSD  840
QNRILDQTLL PLPDNNERIN LTDGFAFRVK ANFGEKKIRF SLPPKCSFRD LQLEIMRRFA  900
LDDITMIDIK YLDDDREWVL LTCNADLQEC LEIHRQSQNR TMRICLQQAP SDQLIEESPF  960
GSSSSPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17150.1	0.0	Nin-like family protein