PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66159.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB_related

Protein Properties

Length: 579aa MW: 64156.4 Da PI: 6.7241

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.5	4.6e-11	530	577	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +W+ E++ l ++v+++G+g+Wk+I + + Rt+ ++k++w++ PON66159.1 530 KWSLLEEDTLRNGVQKYGKGNWKLILNSYRdifEERTEVDLKDKWRNM 577 8*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MDVARWILEF LIRNPDNERL AKRALAVMPI PNDDSRLKKI VLLRTIECEV SDASVTEAIL 60 DNLESVEELD SGQDAAMADS MKAAYCAVAL ECTVKFLVSN GGKPGGKYLN ALKRVWRGRV 120 SRLERSGESQ LFTTDLKRCW DEVEAAIWDD GVCKKLLSRN TRNEAVRLVL EYLKEAWALM 180 GPSFVEWATT LTAKQGGLAQ LGDGGVGSRA VESSGNEPEV GVGGVDGAVE RREPVAAELA 240 SPSRGLRVKG MLELANEVRD QRGSSNDQVC DKAVDVPAGL PNSTDFVISD RPASNVKESL 300 REKVVPRNKQ VAFHKRRRGP VRISDVEDSD TDPSDGRCNA IPTPEVIRIH EALKSSCLEL 360 RAVVTDPLPE ALRVAAAILS DLATKNVNHE PHLESQRGKE ADVVNPSVEK RAEPVQSTKD 420 VNHEPPLESP RATEADAANP SVEKSTERVQ PSDANLGNPS CSHQNNVLRP SLMARNSTAH 480 TYEWNDSIDD SPESMANGNR LHLPSPKRMA ISPLKKYEVK NVSKRRKIKK WSLLEEDTLR 540 NGVQKYGKGN WKLILNSYRD IFEERTEVDL KDKWRNMTR

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MDVARWILEF LIRNPDNERL AKRALAVMPI PNDDSRLKKI VLLRTIECEV SDASVTEAIL  60
DNLESVEELD SGQDAAMADS MKAAYCAVAL ECTVKFLVSN GGKPGGKYLN ALKRVWRGRV  120
SRLERSGESQ LFTTDLKRCW DEVEAAIWDD GVCKKLLSRN TRNEAVRLVL EYLKEAWALM  180
GPSFVEWATT LTAKQGGLAQ LGDGGVGSRA VESSGNEPEV GVGGVDGAVE RREPVAAELA  240
SPSRGLRVKG MLELANEVRD QRGSSNDQVC DKAVDVPAGL PNSTDFVISD RPASNVKESL  300
REKVVPRNKQ VAFHKRRRGP VRISDVEDSD TDPSDGRCNA IPTPEVIRIH EALKSSCLEL  360
RAVVTDPLPE ALRVAAAILS DLATKNVNHE PHLESQRGKE ADVVNPSVEK RAEPVQSTKD  420
VNHEPPLESP RATEADAANP SVEKSTERVQ PSDANLGNPS CSHQNNVLRP SLMARNSTAH  480
TYEWNDSIDD SPESMANGNR LHLPSPKRMA ISPLKKYEVK NVSKRRKIKK WSLLEEDTLR  540
NGVQKYGKGN WKLILNSYRD IFEERTEVDL KDKWRNMTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	1e-18	MYB_related family protein