PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON65421.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 28359.8 Da PI: 6.102 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 153.2 | 1.1e-47 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Pt+eelv++yL++k+e+k+ ++++v+k +diy++ePwdLpk +++++++w+fF++r++++a+g ++nr+t+sgyWkatg+ v+s+ PON65421.1 4 LPPGFRFYPTEEELVSFYLRNKLEAKRDDINRVVKVIDIYSIEPWDLPKysgeLCQGDTEQWFFFTPRQEREARGGKPNRTTASGYWKATGSPSYVFSS 102 79****************************999***************656654455777*************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kkt+vfykg+ap+g+kt+W m+eyr+ PON65421.1 103 DNRVIGVKKTMVFYKGKAPTGRKTKWKMNEYRA 135 *******************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 247 aa Download sequence |
MPELPPGFRF YPTEEELVSF YLRNKLEAKR DDINRVVKVI DIYSIEPWDL PKYSGELCQG 60 DTEQWFFFTP RQEREARGGK PNRTTASGYW KATGSPSYVF SSDNRVIGVK KTMVFYKGKA 120 PTGRKTKWKM NEYRAIEEVN NPNSVTTPML RHEFSLCRVY VISGCFRAFD RRPIKSTRDT 180 REQQGDQAGP SAQITTMVER AATSSPETSS SGEPAELPMA AGSGSTEWEM NDNLEQPLWE 240 WEQLNWP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 2e-91 | NAC family protein |