PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65130.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 700aa    MW: 78864.1 Da    PI: 7.0532
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3902.7e-1193276981374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av+++d++ a++lL+++++++sp gd +qRla++f+ +L+arla ++s++yk l +++ts    +++l+a++l+  ++P+ k+s+++ N
  PON65130.1 327 LRTLLIQCAQAVAADDHRSANELLKQVRQHSSPFGDGTQRLASCFADGLEARLACTGSQIYKGLVSKRTS---AAHVLKAYRLYLAACPFRKMSNFASN 422
                 6789************************************************************999999...999*********************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I++ + +++rvH+iDf+i +G+QWp+L+q L+ R++gpp+lRiTg++ p++g   +e++eetg+rL+ +A++++vpfe+n+ +ak++e+++le+L++
  PON65130.1 423 KTIMNVTTKATRVHVIDFGILYGFQWPTLIQRLSMRDGGPPKLRITGIEFPQPGfrPAERVEETGRRLKAYAKSFNVPFEYNA-IAKKWETITLEDLNI 520
                 *****************************************************9*****************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E+l+Vn+ ++ ++lldesv++es+r+ vL l+++++P+++++   + ++n++ F++rf eal ++salfd+le+ +pr + er+ +E+e++gre+ 
  PON65130.1 521 DSDEVLIVNCLYRGKNLLDESVTVESARNVVLALIRKINPDIFIHGIVNGSYNAPFFVTRFREALFHFSALFDMLEMIVPRGEPERMLIEKEIFGREAL 619
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv+aceg er+er e++++W+ r++++GF + p++ +++ +a   +r ++   + ++e+sg+l++gWk+r ++++S+W+
  PON65130.1 620 NVIACEGWERVERPESYKQWQIRIMRSGFVQEPIDRSIMRKATEKVRSTYHSDFIIDEDSGWLLQGWKGRIIFAISSWK 698
                 **************************************************777*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 700 aa     Download sequence    
METPSNGNLL SSVSHGVNSP EDCDFSDTVL KYISQMLMEE EDMEDKTCLV QESSDLQAAE  60
KSFYEVLGEK YPPSPEQSHR HVFQNGESPD ENFTTNSNNY INSSVYSSEY LVDHTLYHPN  120
MGDYTSQLHF LPGYGVSQSS YSSSHSAISS LDGLLDSPSS IVQVPDLSSE SRSVWQFRKG  180
VEEASRFLPT RNEMVVNLEA NGYLAQDPLR VGTNEVSVKS EKKDDGECSP GSSRGRKNPY  240
REDKNLEEER SSKQAAVYIE STLRSKLFDL VLLSSLGDGK AHLTSFRESL RSELTKSMLQ  300
NGQLKGSKGG KGSRGKKVGR KKEVVDLRTL LIQCAQAVAA DDHRSANELL KQVRQHSSPF  360
GDGTQRLASC FADGLEARLA CTGSQIYKGL VSKRTSAAHV LKAYRLYLAA CPFRKMSNFA  420
SNKTIMNVTT KATRVHVIDF GILYGFQWPT LIQRLSMRDG GPPKLRITGI EFPQPGFRPA  480
ERVEETGRRL KAYAKSFNVP FEYNAIAKKW ETITLEDLNI DSDEVLIVNC LYRGKNLLDE  540
SVTVESARNV VLALIRKINP DIFIHGIVNG SYNAPFFVTR FREALFHFSA LFDMLEMIVP  600
RGEPERMLIE KEIFGREALN VIACEGWERV ERPESYKQWQ IRIMRSGFVQ EPIDRSIMRK  660
ATEKVRSTYH SDFIIDEDSG WLLQGWKGRI IFAISSWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein