PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65109.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 344aa    MW: 38773.3 Da    PI: 7.7497
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20192242255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAaka+++a+ kl+g
  PON65109.1 192 HYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTFDTAIEAAKAYDRAAFKLRG 242
                 8********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MAAINDVSKL EYIKQHLLGD FSPVGVSNFD QNEWSSEVNT EFSTSHSDSL CSKTSSSDSM  60
IGVSSYFEFT SSEIRFEPNA NEFFGFEPKP ELIDLSTPES RNLTSQLSNS SFEFEFESKP  120
RIIDPRAHTS QSNSISFGFE SKPQILHRTS SQSNRKPSLT ISLPPKTEWI QFGAPNPQVS  180
VQKPLAEEDR KHYRGVRQRP WGKFAAEIRD PKRRGSRVWL GTFDTAIEAA KAYDRAAFKL  240
RGSKAILNFP LEAGKYDSAN AVEKKRRRQE EDNQERESKK TVLAVKKEKL TESDDAVSYL  300
KNMPLTPSNW TAVWDSDGKG LFSVTPLSPL SPHPPFGYSQ LMVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.16e-71ERF family protein