PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65059.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 365aa MW: 39384.3 Da PI: 5.9998

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.7	6.7e-16	194	240	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq PON65059.1 194 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 240 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MEDLYGTAPS SGNNGLASES EEINNILNQL LHSSSSSSAY SSSSSSSSSC MTFKTKYTHL 60 LHSQPPPASF SDTVSGSGLL GSEAPQEDRI GFGRSDNRSE LDYRVFHGSS GAGSSSGFNF 120 SDPGGYFGGE VKDGAEKTFS SAGLVDSDAK RRRVSPENDF GDFSCDSEGA EGSEMPTNSA 180 PPRSSSKRSR AAEVHNLSEK RRRSRINEKM KALQNLIPNS NKTDKASMLD EAIEYLKQLQ 240 LQVQMLSMRN GLSLHPMCLP GVLQPMQLPL PQTGLGYNEG PKYLNSNRGI STFSGVEESL 300 MHSAYNLSNT STISNQPTTI PSLANIATTP EPSLGFEQSI QTHSDQSVFQ HPQRICATME 360 NHNCK

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MEDLYGTAPS SGNNGLASES EEINNILNQL LHSSSSSSAY SSSSSSSSSC MTFKTKYTHL  60
LHSQPPPASF SDTVSGSGLL GSEAPQEDRI GFGRSDNRSE LDYRVFHGSS GAGSSSGFNF  120
SDPGGYFGGE VKDGAEKTFS SAGLVDSDAK RRRVSPENDF GDFSCDSEGA EGSEMPTNSA  180
PPRSSSKRSR AAEVHNLSEK RRRSRINEKM KALQNLIPNS NKTDKASMLD EAIEYLKQLQ  240
LQVQMLSMRN GLSLHPMCLP GVLQPMQLPL PQTGLGYNEG PKYLNSNRGI STFSGVEESL  300
MHSAYNLSNT STISNQPTTI PSLANIATTP EPSLGFEQSI QTHSDQSVFQ HPQRICATME  360
NHNCK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	154	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	8e-40	bHLH family protein