PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64996.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

GRAS

Protein Properties

Length: 714aa MW: 76551.6 Da PI: 6.3517

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64996.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	248.3	2.9e-76	494	708	2	227
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lLl+cAeavs++++ +a+++L ++sel++p g++ qR+aayf eA++arl++s+ ++y+a+p+ ++++s++ ++a+++f+ +sP++kfsh+taNq PON64996.1 494 LTLLLQCAEAVSADNFDEANKILLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAAVPAAGVPQNHSQRMASAFQVFNGISPFVKFSHFTANQ 592 579********************************************************************************************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199 aI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g s ++le+tg+rL++fA++lg+pfef + va+++ +l++e+L+v+++ PON64996.1 593 AIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMDSLEATGKRLSDFADKLGLPFEFFP-VADKVGNLDPERLNVSKR 686 *********************************************....***********************.7************* PP GRAS 200 EalaVnlvlqlhrlldesvsleserdev 227 Ea+aV++ h+l+d ++s ++ + PON64996.1 687 EAVAVHWLQ--HSLYDVTGSDTN----T 708 *****99..888887877776....4 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MAASALLSSD NAGGDTTSPD VSGNAAATNN TNNSNNHTSA AAHVAGAGGS NSSGSSEDLS 60 ITVNRRRFQP QQQQQQRQAV LSVEGGKMVR KRMASEMEVQ TATAAAAADY LRLSRRGVPM 120 TIGFSFPATG DSNSSDSNMI SYNVIPAPNP NTSGSAPTLV RPSSVSTTVI NPNYSTLLPS 180 STSLTNMTSG GVLSSSNIAT SSQIDPLHYH HPPPHHHHNY NNQIRSLPHQ THQQYQSPAV 240 CGFSGLPLFP PETTSREVNT NTNNNININN TSSNTNTNNN NNNNPSTSPP AAGSSGCRVI 300 SPTTTSSTTT SSMDDNNQNH HNHSASATAW IDGIIKDLIH SSTNVSIPQL IHNVREIIYP 360 CNPNLATLLE YRLRTCIASD PPPPQNVAIF SPQPESSPVA AAAAAMNNNN NNNNSDLYLH 420 WGGAVLPPPP LPPSTTTAAV VDVQSHHAPQ QDQHPESSSP AEEPVPVPSP AVLLREKKEE 480 LRQQKRDEEG LHLLTLLLQC AEAVSADNFD EANKILLEIS ELSTPFGTSA QRVAAYFSEA 540 MSARLVSSCL GIYAAVPAAG VPQNHSQRMA SAFQVFNGIS PFVKFSHFTA NQAIQEAFER 600 EERVHIIDLD IMQGLQWPGL FHILASRPGG PPYVRLTGLG TSMDSLEATG KRLSDFADKL 660 GLPFEFFPVA DKVGNLDPER LNVSKREAVA VHWLQHSLYD VTGSDTNTLW LLQR

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MAASALLSSD NAGGDTTSPD VSGNAAATNN TNNSNNHTSA AAHVAGAGGS NSSGSSEDLS  60
ITVNRRRFQP QQQQQQRQAV LSVEGGKMVR KRMASEMEVQ TATAAAAADY LRLSRRGVPM  120
TIGFSFPATG DSNSSDSNMI SYNVIPAPNP NTSGSAPTLV RPSSVSTTVI NPNYSTLLPS  180
STSLTNMTSG GVLSSSNIAT SSQIDPLHYH HPPPHHHHNY NNQIRSLPHQ THQQYQSPAV  240
CGFSGLPLFP PETTSREVNT NTNNNININN TSSNTNTNNN NNNNPSTSPP AAGSSGCRVI  300
SPTTTSSTTT SSMDDNNQNH HNHSASATAW IDGIIKDLIH SSTNVSIPQL IHNVREIIYP  360
CNPNLATLLE YRLRTCIASD PPPPQNVAIF SPQPESSPVA AAAAAMNNNN NNNNSDLYLH  420
WGGAVLPPPP LPPSTTTAAV VDVQSHHAPQ QDQHPESSSP AEEPVPVPSP AVLLREKKEE  480
LRQQKRDEEG LHLLTLLLQC AEAVSADNFD EANKILLEIS ELSTPFGTSA QRVAAYFSEA  540
MSARLVSSCL GIYAAVPAAG VPQNHSQRMA SAFQVFNGIS PFVKFSHFTA NQAIQEAFER  600
EERVHIIDLD IMQGLQWPGL FHILASRPGG PPYVRLTGLG TSMDSLEATG KRLSDFADKL  660
GLPFEFFPVA DKVGNLDPER LNVSKREAVA VHWLQHSLYD VTGSDTNTLW LLQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54220.1	1e-139	GRAS family protein