PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON64979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | bHLH | ||||||||
Protein Properties | Length: 236aa MW: 26129.8 Da PI: 6.7991 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.5 | 2.8e-09 | 81 | 127 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RR+++N++f eL ++l + + +K++Ka iL +v+ + +L PON64979.1 81 KACREKMRREKLNDRFLELGSILDPG---RPPKMDKAVILGDVVRMVTQL 127 678**********************8...89*************999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGSGGNPNWV FDYSLIEDLG VPGGDLPSLE PPGFTWPSHS FTAQTDLSVE FDESFANDDV 60 LKETGSRKRV RPGSCSASGS KACREKMRRE KLNDRFLELG SILDPGRPPK MDKAVILGDV 120 VRMVTQLRKE SQKLKESNES LQEKINELKV EKNELRDEKQ RLKAEKDILD KQVKALTTQP 180 SFMHPPAIPA PFSSPGQVVG GKLVPFVGYP GISMWQFMPP ATVDTSQDHV LRPPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 2e-88 | bHLH family protein |