PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON64307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 247aa MW: 27906.2 Da PI: 9.9212 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 91 | 1.1e-28 | 47 | 95 | 2 | 55 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRr 55 + v Y+eC+kNhAas+Ggha+DGCgEfmps ++++lkCa CgCHRnFH r PON64307.1 47 MVVSYRECRKNHAASIGGHALDGCGEFMPS-----DPTSLKCATCGCHRNFHIR 95 5789*************************9.....799**************77 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 247 aa Download sequence |
SSQVMDLSPT TKTTPDTDTE TPPLPQPTTS LSYNNGHHEH LYAPPQMVVS YRECRKNHAA 60 SIGGHALDGC GEFMPSDPTS LKCATCGCHR NFHIRYHPEG PTTSKRHRSS SPSPSSNPGP 120 TPSPHSAPPD SHFASPPQIF LALSTGFSSD DHHQHTHQSL NPTVVKYSSE TNPNSRKRVK 180 TKFSQEQKEK MCFFAEKMGW KMQRRDKRLV EEFCKEVGVR RGVFQVWMYR NKRKRDRATG 240 SHNQQPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69600.1 | 6e-46 | ZF-HD family protein |