PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON64301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 717aa MW: 79432 Da PI: 6.1812 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 51.9 | 1.3e-16 | 65 | 117 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++t++q++ +e++F++++ p+ ++++eL+++lgLt qVk+WFqN+R + k PON64301.1 65 NRRHTRHQIQKMEAFFKECPLPNDKQKKELSRELGLTPLQVKFWFQNKRNQIK 117 5689*********************************************8876 PP | |||||||
2 | START | 216.2 | 1.1e-67 | 246 | 466 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 ela +a++el+ +a+ +ep+W++s +n++e++++f+++ + ++ ea+r+ vv+m++ +lve+l+d++ qW++ + +a+tlev+s PON64301.1 246 ELAIAAMEELIMMAQMGEPLWMTSLdgasVVLNEEEYIRTFPRETGpkaagFKCEASREASVVIMNTINLVEILMDVS-QWSTIFSgvvsRAMTLEVLS 343 57899********************999999**********99888********************************.******************** PP TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS START 87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178 +g ga q+m+ae q++splvp R+++fvRy++q+ +g+w++vdvS+d+ ++ p vR++++pSg+l+++++nghskvtwvehv+++ r +h PON64301.1 344 TGvsgnfnGAMQVMTAEIQVPSPLVPtRESYFVRYCKQHADGTWAVVDVSLDNLRPSPA----VRCRRRPSGCLFQEMPNGHSKVTWVEHVEVDYRDVH 438 ********************************************************995....************************************ PP HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 179 wllrslvksglaegaktwvatlqrqcek 206 +l+++lv+sg+a+gak+wvatl+rqce+ PON64301.1 439 NLYKQLVNSGHAFGAKRWVATLDRQCER 466 **************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 717 aa Download sequence |
MIQPNIMEGG HQLHHPLYMT AQNTTSESDL NIRLGRYDNV FDSENQKGGS SSDDQDQQVP 60 KKRFNRRHTR HQIQKMEAFF KECPLPNDKQ KKELSRELGL TPLQVKFWFQ NKRNQIKTQH 120 ERHENIQLRT ENEKLSADNV RYREALSRHS LCPNCGGPTP TIGEMSFYEH NLRVENARLR 180 EEIDLNSAIA AENMGNPVVN PLLSSTVPPR PVQLGPPAGM GGEMYGGATG DLLSEPNEAD 240 KNIIIELAIA AMEELIMMAQ MGEPLWMTSL DGASVVLNEE EYIRTFPRET GPKAAGFKCE 300 ASREASVVIM NTINLVEILM DVSQWSTIFS GVVSRAMTLE VLSTGVSGNF NGAMQVMTAE 360 IQVPSPLVPT RESYFVRYCK QHADGTWAVV DVSLDNLRPS PAVRCRRRPS GCLFQEMPNG 420 HSKVTWVEHV EVDYRDVHNL YKQLVNSGHA FGAKRWVATL DRQCERLASA TATNIQTGDI 480 GVTTNQDGRK SMLKLSERMV ISFYAGVSAS TTHTWTTISG TETDNIRIMT RKSMDDPGTP 540 PGIVLNVATS FWLPIPPKRV FDFLREENSR SEWDILSNGG VVQEMTHIAN GRDTGNCLSL 600 LRINSDNSFQ SKTLILQESC TDQTASFVIY APVDTVAMNV VLNGGDPDKV ALLPSGFAIL 660 HNSDRGIPGG SLLTVAFQIL VDSVPTAKLS LGSVATVNNL IAWTVERIKA SLSCDNA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05230.4 | 0.0 | HD-ZIP family protein |