PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON64068.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 277aa    MW: 31377.5 Da    PI: 9.1399
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON64068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.3e-11100148555
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 h e+Er+RR+++   ++ Lr+l+P       ++K s ++   +A +YIk+Lq
  PON64068.1 100 HREIERQRRQEMSALYSSLRSLIPLqY---LKGKRSISDQMHEAAKYIKDLQ 148
                 99***********************66...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDYIPPSMFQ LFDQTSADDL LQMISTFPCK LDPKHEIQLE DHDQVPPPTP SDQEGRDHPP  60
HKLNNSGGRR SRSSSVADHG KNHDDDENPN DKKKKKMIIH REIERQRRQE MSALYSSLRS  120
LIPLQYLKGK RSISDQMHEA AKYIKDLQRK NQELSTKRDN LRRLSNSSSS ASSCNTDIIG  180
SDQNSKRHNK NLEPTNIIMR HCKAGSVEVL VNTAFREGLS LARVVGVLTG EGFNVVRCIS  240
AKVNGRYLHT IESEAVSGEI KSMDLPELEK KLKNLIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-22bHLH family protein