PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON64055.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 24850.5 Da PI: 9.4673 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.7 | 4.3e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s PON64055.1 9 KRIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 76.1 | 9.1e-26 | 91 | 180 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +e++++ ++++ + k+ie L+ ++R+llG++L+s+s+ eLqq+e+qLe+sl kiR++Kn+l++eqie+l++ e++l e+n +Lr++ PON64055.1 91 DHEHQSAMSKEDTFSMAKKIEHLEVSKRKLLGDGLDSCSIHELQQIENQLERSLGKIRARKNQLYKEQIEHLKEEERSLLEQNAKLREQC 180 56667778889999*************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MVRGKTQMKR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 RCISINKTIE RYTQRKAKDG GLSSAKAVSE DHEHQSAMSK EDTFSMAKKI EHLEVSKRKL 120 LGDGLDSCSI HELQQIENQL ERSLGKIRAR KNQLYKEQIE HLKEEERSLL EQNAKLREQC 180 GMVPLLPSTE QPEVVHNIGQ NMEVETELFI GLPERRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 3e-80 | MIKC_MADS family protein |