PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON64003.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family FAR1
Protein Properties Length: 245aa    MW: 28647.3 Da    PI: 8.1011
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON64003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.73.4e-2774165191
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 +fY+ Y++++GF++r++++++s ++++i+ r+fvCskeg+r+e+  +  +k  ++r +tr gC+a++++  ++ gkw+++ +++eHnHel+p
  PON64003.1  74 EFYEMYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRSEKCAHrVNKILSSRLTTRKGCNAMMRIAAKNGGKWVIYGFVKEHNHELNP 165
                 6*****************************************99888456667899*********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MASTSDLGIN SNRNYRRWLD ETSDGDETVD DELSDTLHGH YDMIQPSTQS LSSAFEPLEP  60
IVGMELDSAE SAREFYEMYG RRMGFTIRNN RTRRSLKDNS IIGREFVCSK EGFRSEKCAH  120
RVNKILSSRL TTRKGCNAMM RIAAKNGGKW VIYGFVKEHN HELNPNKIPP RRSHRIAFSE  180
DEKDLKIREL STELHRERKK SAAYQEQLQI VWRYIEEHTQ KLSLKVEMVT KNMRELEAEE  240
QQFIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-45FAR1 family protein