PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON63742.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 440aa MW: 49708.3 Da PI: 5.4011

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON63742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.2e-12	217	268	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ PON63742.1 217 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 268 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MEKEDNYSAP MPPNFAALDN YTIDHHHQQQ HHEQSHIDDT STADQNDDRL MVNYLLNMNS 60 NNNNPHHHHQ QQQQQLSFAD VMQFADFGPK LGLNQTNKIP EEQEEDHDQP GNDMVDPVYF 120 LKFPVLNDKN IMEDHHHSQS FNVVPLLPAG NDIVCQVKDK EIVREDQDHD DSSVQLQFLG 180 DDLQKLNNPS SEPNNNKNNN KRKRPRTAKT SEEVESQRMT HIAVERNRRK QMNEHLRVLR 240 SLMPGSYVQR GDQASIIGGA IEFVRELEQL LQCLESQKRR RLLGDQAPRQ QVVGADPGGG 300 GGGGVAVVPV QPNPGGPFFP PLPLPNDQTM NKFVDFETGV GLREETAENK SCLADVEVKL 360 LGFDAMIKIL SRRRPGQLIK AIAALEDLQF NILHTNITTI EQTVLYSFNV KVTSESRSTA 420 EDIASSVQQI FNFIHANSSM

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MEKEDNYSAP MPPNFAALDN YTIDHHHQQQ HHEQSHIDDT STADQNDDRL MVNYLLNMNS  60
NNNNPHHHHQ QQQQQLSFAD VMQFADFGPK LGLNQTNKIP EEQEEDHDQP GNDMVDPVYF  120
LKFPVLNDKN IMEDHHHSQS FNVVPLLPAG NDIVCQVKDK EIVREDQDHD DSSVQLQFLG  180
DDLQKLNNPS SEPNNNKNNN KRKRPRTAKT SEEVESQRMT HIAVERNRRK QMNEHLRVLR  240
SLMPGSYVQR GDQASIIGGA IEFVRELEQL LQCLESQKRR RLLGDQAPRQ QVVGADPGGG  300
GGGGVAVVPV QPNPGGPFFP PLPLPNDQTM NKFVDFETGV GLREETAENK SCLADVEVKL  360
LGFDAMIKIL SRRRPGQLIK AIAALEDLQF NILHTNITTI EQTVLYSFNV KVTSESRSTA  420
EDIASSVQQI FNFIHANSSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	229	RMTHIAVERNRR
2	278	282	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-116	bHLH family protein