PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON63394.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 417aa MW: 46761.7 Da PI: 6.1378

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON63394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.6	1.7e-16	81	170	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +k++++s+v +l lpkkf++++ +k ++ +++ledesg++ e k+ + + l++GW+ F a++L egD+vvF+l++ +++v ++r+ PON63394.1 81 VKTMLHSHVCVGFWLGLPKKFCDSYL-PK-QDSMMVLEDESGEVCEAKY--LAEK--VGLSGGWRAFSIAHKLAEGDVVVFHLVS--PLKFKVYIVRS 170 69999******************4.33.4559***********..4444..55*********************986..55558888775 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MAVAEHIKAP SNSSPQKVKR GRPPKKQEKQ QVCSKPMKSE SNKRKRATVE SLYDDPKAWS 60 SIMERAYEVQ ANLAPEFPSL VKTMLHSHVC VGFWLGLPKK FCDSYLPKQD SMMVLEDESG 120 EVCEAKYLAE KVGLSGGWRA FSIAHKLAEG DVVVFHLVSP LKFKVYIVRS NCSDEVDCAL 180 GLLKLEANMK QETKSLEPLP LDNPVNNIQM TISSASDQSD KDSVDIRPEV LDGLRLSESV 240 ISFEEVRNIG DFNILVNGLI INSELPKCFL AKYHELCCSQ KTYLHEHLLE GLNCKLVVGV 300 ISETINIADG IRASKLTSSV DDFATWDKTL KAFEGLGMNV GFLRSRLDQL FGLVSKSKRY 360 ENVRLDWEDA KEELRDLEAK ISVVKEKMIR LSTELEALGT NSQELQLIFQ EVASASW

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MAVAEHIKAP SNSSPQKVKR GRPPKKQEKQ QVCSKPMKSE SNKRKRATVE SLYDDPKAWS  60
SIMERAYEVQ ANLAPEFPSL VKTMLHSHVC VGFWLGLPKK FCDSYLPKQD SMMVLEDESG  120
EVCEAKYLAE KVGLSGGWRA FSIAHKLAEG DVVVFHLVSP LKFKVYIVRS NCSDEVDCAL  180
GLLKLEANMK QETKSLEPLP LDNPVNNIQM TISSASDQSD KDSVDIRPEV LDGLRLSESV  240
ISFEEVRNIG DFNILVNGLI INSELPKCFL AKYHELCCSQ KTYLHEHLLE GLNCKLVVGV  300
ISETINIADG IRASKLTSSV DDFATWDKTL KAFEGLGMNV GFLRSRLDQL FGLVSKSKRY  360
ENVRLDWEDA KEELRDLEAK ISVVKEKMIR LSTELEALGT NSQELQLIFQ EVASASW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-39	B3 family protein