PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON63265.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB_related

Protein Properties

Length: 470aa MW: 51494.4 Da PI: 6.7808

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON63265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	6.1e-17	55	99	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ PON63265.1 55 REKWTEEEHQKFLEALKLYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 99 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MVVEEASEGM GLNTPVVAGN CSSKGDPKCK SENQMQEISE GAPKVRKPYT ITKQREKWTE 60 EEHQKFLEAL KLYGRGWRQI EEHVGTKTAV QIRSHAQKFF SKVVRGSNGS VEACMKPIEI 120 PPPRPKRKPM HPYPRKSVHS LNGTSIINQP ERSPSPNFAA TDKGMKSPTS VLSSQGSDAL 180 GSAASDQHNR SPSSTSCTTD MQSISLSPSE KENDYLMSNS FAEEKISLPA NGLSAHSTSV 240 NFLSVKIESG AKDTACTEGE EAKLSASTSF KLFGKTVLLS DLEKESPSGA EDSKTLQTDE 300 GLLVKLSPDQ LDTNLSLGGF VSNGSPFSST TPFNQMEQQK ESSNTVKADA AMLLWSLYQA 360 PFHYPVAYNS SIDKTRPISS AEEKMEDKEV QKERSCTDSN EGSANGEENL GDKNIEAVDS 420 FSHEPCTKRS VEPCNSRRGF VPYKRCLAER DNASSTIISN DRERRKIRVC

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MVVEEASEGM GLNTPVVAGN CSSKGDPKCK SENQMQEISE GAPKVRKPYT ITKQREKWTE  60
EEHQKFLEAL KLYGRGWRQI EEHVGTKTAV QIRSHAQKFF SKVVRGSNGS VEACMKPIEI  120
PPPRPKRKPM HPYPRKSVHS LNGTSIINQP ERSPSPNFAA TDKGMKSPTS VLSSQGSDAL  180
GSAASDQHNR SPSSTSCTTD MQSISLSPSE KENDYLMSNS FAEEKISLPA NGLSAHSTSV  240
NFLSVKIESG AKDTACTEGE EAKLSASTSF KLFGKTVLLS DLEKESPSGA EDSKTLQTDE  300
GLLVKLSPDQ LDTNLSLGGF VSNGSPFSST TPFNQMEQQK ESSNTVKADA AMLLWSLYQA  360
PFHYPVAYNS SIDKTRPISS AEEKMEDKEV QKERSCTDSN EGSANGEENL GDKNIEAVDS  420
FSHEPCTKRS VEPCNSRRGF VPYKRCLAER DNASSTIISN DRERRKIRVC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	5e-55	MYB_related family protein