PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62879.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 642aa MW: 71777.2 Da PI: 5.1802

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39	1.4e-12	443	488	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h ErrRR+r+N++f+ L+ ++P++ +K+++L A++Y+k+L PON62879.1 443 NHALSERRRRERLNEKFSILKMMVPSL-----SNEDKVSVLDDAIQYLKEL 488 7999********************8.....46799**********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 642 aa Download sequence
MATEPQNEEG VLPDNLNKRI ALAVRSIQWS YAIFWSISST QPGVLEWEEG YYNGDIKTRK 60 TTQAIELNAD EMGLQRSEQL SELYDSLSAG ETSPQAKRPS AALSPEDLSD AEWYYLVCMS 120 FVFNIGQGLP GRALANGQPI WLYNAHYADS KVFSRSLLAK SASIQTVVCF PLLGGVIELG 180 TTDLVVEDCA LIQQVKMSIL EIPCPVSYKK SDCSAGNTRN DHGFAYAAVD HDLLNTNTIP 240 VVVQGELIMS SPSGSSDGFE PNQPAVDSLM EEGLNGAVSQ VQSWQIMDEE LSNCVNHSMD 300 SSDCISQTLV DPEKFESGPK HERVEDHALQ DRQVYNHTKM SSLDLQSEDL HYQSVISTLL 360 KSSHQLILGP HFQKFHHESS FVGWRKRGVL KLLQPTGGTS QKLVKKILFE VPRMHLNCII 420 DSPEDDCIGN VVWRPEADEI GMNHALSERR RRERLNEKFS ILKMMVPSLS NEDKVSVLDD 480 AIQYLKELKR RVEELESGRE STDLEPKTKR KPQDAREGTS DNYGNKKISS RKEQFINKRK 540 ARDMDEVEPE IHHDVSKDSS AGNIAVIMKN KDVLIKINCP WREGVLLEIM DALSNLHLDS 600 HSVQSSTMDG IISLTIQSMI KCSAPISVAT IKQALQKIAW NC

Sequence ? help Back to Top

Protein Sequence Length: 642 aa Download sequence

MATEPQNEEG VLPDNLNKRI ALAVRSIQWS YAIFWSISST QPGVLEWEEG YYNGDIKTRK  60
TTQAIELNAD EMGLQRSEQL SELYDSLSAG ETSPQAKRPS AALSPEDLSD AEWYYLVCMS  120
FVFNIGQGLP GRALANGQPI WLYNAHYADS KVFSRSLLAK SASIQTVVCF PLLGGVIELG  180
TTDLVVEDCA LIQQVKMSIL EIPCPVSYKK SDCSAGNTRN DHGFAYAAVD HDLLNTNTIP  240
VVVQGELIMS SPSGSSDGFE PNQPAVDSLM EEGLNGAVSQ VQSWQIMDEE LSNCVNHSMD  300
SSDCISQTLV DPEKFESGPK HERVEDHALQ DRQVYNHTKM SSLDLQSEDL HYQSVISTLL  360
KSSHQLILGP HFQKFHHESS FVGWRKRGVL KLLQPTGGTS QKLVKKILFE VPRMHLNCII  420
DSPEDDCIGN VVWRPEADEI GMNHALSERR RRERLNEKFS ILKMMVPSLS NEDKVSVLDD  480
AIQYLKELKR RVEELESGRE STDLEPKTKR KPQDAREGTS DNYGNKKISS RKEQFINKRK  540
ARDMDEVEPE IHHDVSKDSS AGNIAVIMKN KDVLIKINCP WREGVLLEIM DALSNLHLDS  600
HSVQSSTMDG IISLTIQSMI KCSAPISVAT IKQALQKIAW NC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	448	453	ERRRRE
2	485	491	LKELKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein