PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62625.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 279aa MW: 31917.5 Da PI: 6.446

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++++G g+W++ ++ g+ R++k+c++rw +yl PON62625.1 14 KGPWTPEEDHILISYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52.1	1.5e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l PON62625.1 67 RGNFTRDEEETIIKLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MVRAPCCEKM GLKKGPWTPE EDHILISYIQ RYGHGNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TRDEEETIIK LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLTQNH 120 VVQKTKRHHN HKAKDEPHDH LVLPTNFSSD AKYDIVEDRP VSPPQSSSSS TAISSVTTST 180 DDDHNNNSNN GSIKADSPDN FSEMDEDFWS QVFSSENNSK AVVDDFSAIS ADSQLQYSVS 240 PLVTIEPDHA LNSNMYNDED MDFWYNVFTR AADLPELLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	1e-80	MYB family protein