PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62300.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 348aa MW: 39964.7 Da PI: 4.7294

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.1	1.4e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yL +k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd++v+s ++ PON62300.1 6 LPPGFRFHPTDEELVAYYLDRKITGQTIEL-EIIPEVDLYKCEPWDLPdKsYLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRPVHS-QR 102 79**************************.99**********95335666888**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kktLv+y+grap+g +t+Wvmheyrl PON62300.1 103 RPVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MAPMSLPPGF RFHPTDEELV AYYLDRKITG QTIELEIIPE VDLYKCEPWD LPDKSYLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRPVHS QRRPVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLVDDSLCG TVSSTLKDSY ALCRVFKKTI QIPKCNKEEK TNNGISGRKE 180 KESEAIVNES TTIDHQIPRG LENEDENFCN DYYPNKFLSE TSSSDLTQGT PTETGVGEDF 240 QAPFASDNEA NSAADLYSLG IDCSSNVVQE MQMPSYESLH YQLAYPPLEL EDFPQINLAE 300 MKLMKHEMTE ECMSYDKLKD YMNGTVEEIF SLCSSQDNPI NALSMQEN

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MAPMSLPPGF RFHPTDEELV AYYLDRKITG QTIELEIIPE VDLYKCEPWD LPDKSYLPSK  60
DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRPVHS QRRPVGMKKT LVYYRGRAPH  120
GIRTNWVMHE YRLVDDSLCG TVSSTLKDSY ALCRVFKKTI QIPKCNKEEK TNNGISGRKE  180
KESEAIVNES TTIDHQIPRG LENEDENFCN DYYPNKFLSE TSSSDLTQGT PTETGVGEDF  240
QAPFASDNEA NSAADLYSLG IDCSSNVVQE MQMPSYESLH YQLAYPPLEL EDFPQINLAE  300
MKLMKHEMTE ECMSYDKLKD YMNGTVEEIF SLCSSQDNPI NALSMQEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54330.1	1e-109	NAC family protein