PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62098.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 329aa    MW: 35775 Da    PI: 7.2716
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.28.1e-081573347
                     SS-HHHHHHHHHHHHHTTTT...............-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...............tWktIartmgkgRtlkqcksrwqky 47
                      W+ eE++ + +a++ + +                +W++ a++++  ++ +++k ++q++
       PON62098.1 15 TWSIEEEKAFENAIAIHWSSstttrdqdeeaseeqQWEKMASMVP-SKSMEELKRHYQML 73
                     6*****************99*************************.************87 PP
2Myb_DNA-binding38.72.3e-12162206347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
       PON62098.1 162 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 206
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MSSTSTTATT TTITTWSIEE EKAFENAIAI HWSSSTTTRD QDEEASEEQQ WEKMASMVPS  60
KSMEELKRHY QMLIDDVTAI EEGRIPVPNY PVLVADDPSA TTTMMGKDKD SHVLFGSGSE  120
KRLSSSGHGS SGFSGLHGHD SASGLGGKGG SRADQERRKG IPWTEEEHRL FLLGLDKFGK  180
GDWRSISRNF VISRTPTQVA SHAQKYFIRL NSVNRDRRRS SIHDITSVSN GEVPPHQAPI  240
TGVQQTNINS PSVPAMGAPP VKHRGQTHMP GIGMYGAPMG HPVAAPPGHM GSAVGTPVML  300
PPPGHHHHNH HPPYVVPVAY PMAPPTMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.13e-76MYB family protein