PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61847.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family FAR1
Protein Properties Length: 378aa    MW: 43823.7 Da    PI: 6.8345
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.15.3e-2263156190
        FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 
                 +fY+e+Ak++GFs+r+++++ +    +  t+r fvC + g++  + ++++k +r+r+++r+gC+a ++++k++    ++w+vt + ++HnHel 
  PON61847.1  63 EFYSEFAKQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKASNESKPQRNRKSSRCGCQAYMRISKTTelgGQEWRVTGFANHHNHELL 156
                 6**************9998877356667999*****************999********************9989899**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MMSDETGQML VVYDDPSDHR SLSLDDTSSA EESPDETRLS LETANDTIPY IGQRFSTHDA  60
AYEFYSEFAK QCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPIKASN ESKPQRNRKS  120
SRCGCQAYMR ISKTTELGGQ EWRVTGFANH HNHELLEPNQ VRFLPAYRTI SESDKSRLLM  180
FAKTGISVQQ MMRLMELEKC VEPGYLPFTE KDVRNLLQSF RKLDPEEESI DLLRMCRNIR  240
EKDPNFKFEY TFDSNNRLEN IAWSYASSIQ AYDIFGDAVV FDTTHRLTAF DMPLGIWVGM  300
NNYGMPCFFG CVLLREENLS SFSWALKVIE GTIYFMLLFL HITMSCTYGC TLISRYQSIH  360
YFMWQLDPVK NGWKNRTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.10.0FAR1 family protein