PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61421.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 575aa    MW: 64327.6 Da    PI: 6.4136
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61421.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS436.32.3e-1332055741373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+ +++++ e  ++l+++ ++ +s +g+p+qRl ay++e++ ar   s++++y+al+++e +   s++ l+++++++e++P+lkf++++aN
  PON61421.1 205 LKQLLIACAKSLAENNIETFDKLIEKARTSVSISGEPIQRLGAYMVEGMVARKEASGTNIYRALRCREPE---SKDLLSYMQILYEICPYLKFGYMAAN 300
                 689******************************************************************9...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI ea  +e+r+HiiDf+i+qG+QW++LlqaLa+Rp+gpp++RiTg+++p ++  + + l+++++rLa + +++++p+ef++ v     d++ e+L v
  PON61421.1 301 GAIAEACRSEDRIHIIDFQIGQGTQWLTLLQALAARPNGPPHVRITGIDDPVNQyaRGDGLQAVERRLATISQNFKIPVEFHA-VPVFAPDVTREMLGV 398
                 ***************************************************999999**************************.688899********* PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +pgEalaVn+ lqlh+++desv+++++rde+L++vkslsPkvv++veqe+++n+++F++rf+eal++y a+f+s++++lpr+s++ri+vE+++l+r+iv
  PON61421.1 399 RPGEALAVNFPLQLHHTPDESVDVNNPRDELLRMVKSLSPKVVTLVEQESNTNTTPFFHRFVEALDFYLAMFESIDVTLPRNSKHRINVEQHCLARDIV 497
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nvvaceg+er+erhe l+kW++rl++aGFk++pls+++++ +++llr ++ + y++ e++g+++lgWkdr+L+s+SaW
  PON61421.1 498 NVVACEGRERVERHELLGKWKSRLTMAGFKQYPLSSYVNSVIRSLLRCYS-EHYTLAEKDGAMLLGWKDRNLISASAW 574
                 **********************************************9999.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 575 aa     Download sequence    
MDSHELFGIS VTGPSALSYT SSHPTVPSLP SRLLGSLKFD VGKSPSSPFL AHFDSENSLT  60
TLSDSQEQYS STENNLSGVS PPPCNSPLET NSYFIYPSGN SLLQDGNPSQ NFKHALLELE  120
TALMGPDDDV DNDRLVRPKP SYGEGSSQQS WREERQGQQP SLIQRQTSLV SRPRQSGSVA  180
RIEKRHKSMD EDSLYQQGLP PPDNLKQLLI ACAKSLAENN IETFDKLIEK ARTSVSISGE  240
PIQRLGAYMV EGMVARKEAS GTNIYRALRC REPESKDLLS YMQILYEICP YLKFGYMAAN  300
GAIAEACRSE DRIHIIDFQI GQGTQWLTLL QALAARPNGP PHVRITGIDD PVNQYARGDG  360
LQAVERRLAT ISQNFKIPVE FHAVPVFAPD VTREMLGVRP GEALAVNFPL QLHHTPDESV  420
DVNNPRDELL RMVKSLSPKV VTLVEQESNT NTTPFFHRFV EALDFYLAMF ESIDVTLPRN  480
SKHRINVEQH CLARDIVNVV ACEGRERVER HELLGKWKSR LTMAGFKQYP LSSYVNSVIR  540
SLLRCYSEHY TLAEKDGAML LGWKDRNLIS ASAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-169GRAS family protein