PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON61389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | Dof | ||||||||
Protein Properties | Length: 368aa MW: 38808.5 Da PI: 8.0938 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.5 | 7.2e-39 | 33 | 90 | 5 | 62 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ PON61389.1 33 ALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 90 689****************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MASSTHHGRT TMEKPSQEQV LQQQQQQQQQ GVALKCPRCD SSNTKFCYYN NYSLSQPRHF 60 CKACKRYWTR GGTLRNVPVG GGCRKNKRVK RPAASGATDG SGANSSSSSS ANNNNSNAGS 120 VILQPQIDLS STSHMISPLF YGLPGNPNSD MSHVLPFSRF MSSTTSGYDL HDDQPHQLIN 180 ALGLGFSSSV HGNINDGADH HYQNGFSSSS SSNPTKNIQD IVSSNSLLSS YSSVFSTNTP 240 LSSAAGASPT IASLLASKFT NGGLKDSRGP ISSHFQPLAV PFEDLHIAAA ANGGGEAGKQ 300 VKLEDGQGRL DWSSAAAVAA NNCQNDQTDQ IGLASSDPSL YWNPTAVAVG GNWHDPANSI 360 GSSVPSLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28310.1 | 1e-36 | Dof family protein |