PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60810.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Trihelix

Protein Properties

Length: 300aa MW: 34969.8 Da PI: 4.5106

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	65.7	1e-20	16	107	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 Wt+qe+ +Li+a++e++ +l+rg lk +Weev+ + + ++s++qC++k+e+l++ry+++k++ + sss +pyfd ++ PON60810.1 16 WTHQETVHLIQAYEEKWYSLKRGPLKSSQWEEVAVTVaarcgyDYTEPSKSAIQCRHKMEKLRQRYRAEKQRLLGLdGVSSSSAWPYFDLMD 107 *********************************998666665666689******************988744677889***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MATPPPSAKK PQPIPWTHQE TVHLIQAYEE KWYSLKRGPL KSSQWEEVAV TVAARCGYDY 60 TEPSKSAIQC RHKMEKLRQR YRAEKQRLLG LDGVSSSSAW PYFDLMDRLE RGPLPISARP 120 MIAPPPYRYD PDQDHENDDD DDDNDDDDDD DDDEDEDEDG EYFTKSRSID YILRRPTMVN 180 RFAGVGKLSN GFSGVWAESE PVAKRRRVSV EEEEEEEEDE DENDGILGRR RGREKEREAV 240 LELAKEIRAF SERIVGMESM KMEIIKDTER CRREMETKRI DMILRSQNKI VDSITKAFEI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	208	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24860.1	9e-54	Trihelix family protein