PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60733.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NF-X1

Protein Properties

Length: 1106aa MW: 119437 Da PI: 8.1106

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	22.3	2.8e-07	303	321	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C+++CH GpC++C+ PON60733.1 303 CGRHRCERICHVGPCDQCQ 321 ******************6 PP
2	zf-NF-X1	18.6	4e-06	520	538	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C++lCH G CppC PON60733.1 520 CGQHSCESLCHSGHCPPCL 538 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1106 aa Download sequence
MSSNDRSERR DRPRSTAQPS RREWVPRGSA TVNVANPNPP SSSSSNSNSN TAGNGGDSTN 60 SSAAPQSWYR GNNSSRGQVS RLPNYRRERE RGSETQELGP LREGSTNKNG RVLKDSSLPQ 120 LVQEIQEKLM KGAVECMICY DMVRRSAPVW SCSSCYSIFH LNCIKKWARA PTSVDLSVDK 180 NQGVNWRCPG CQSVQLTSSK EIRYVCFCGK RADPPSDLYL TPHSCGEPCG KPLERDVVGP 240 GWSKEDLCPH VCVLQCHPGP CPPCKAFAPP RICPCGKKTI TTRCSDRKSV LTCGQRCDKV 300 LSCGRHRCER ICHVGPCDQC QVLVNASCFC KKTVEAVLCA DMTVKGEVKA EDGVFSCNSL 360 CGKKLNCGNH FCGEICHPGS CGECGLLPSK TKTCHCGKTI LEKERQSCLD LIPTCSQICQ 420 KLLPCGKHYC EEVCHAGHCP PCLVKVTQKC RCTSTSRNVE CYKTTSDEKF TCDKACGRKK 480 SCGRHRCSER CCPLSNSSNN FSGDWDPHFC SMSCGKKQRC GQHSCESLCH SGHCPPCLET 540 IFTDLTCACG RTSIPPPLPC GTPPPPCQLP CSVPQPCGHS SSHSCHFGDC PPCSVPVAKE 600 CIGGHVVLRN IPCGSRDIRC NKLCGKTRQC GMHACGRTCH PPPCDGHTES EPGLRSSCGQ 660 TCGAPRRDCR HTCIAPCHPS SLCPDVRCDF PVSITCSCGR ITATVPCDAG GSNGSYNADT 720 LYEASVIQKL PVPLQPVEAS TPGKKIPLGQ RKLMCDDECA KLERKRVLAD AFDIAPPNLD 780 ALHFGESSAV SELLGDLYRR DPKWVISVEE RCKYLVLGKS RGTTSGLKVH VFCPMLKDKR 840 DAVRVIAERW KLAVNAAGWE PKRFIVVHVT SKSKVPPRVL GVKGTTTASA PQPPAFDPLV 900 DMDPRLVVSF PDLPRDADIS ALVLRFGGEC ELVWLNDKNA LAVFHDPARA ATAMRRLDHG 960 SVYHGAVATA GASGSSSGTN AWGGAGIAKS NPWKKAVVQE DTWGGEEWSS GGSADVQASA 1020 WKKEAPLAAS LNRWSILDRE SALSSSTSAG IKDLSKGAAV GSLSSLESNA SAQSPAGPYF 1080 GNVTETETTE VVDDWEKAYD TMAEDK

Sequence ? help Back to Top

Protein Sequence Length: 1106 aa Download sequence

MSSNDRSERR DRPRSTAQPS RREWVPRGSA TVNVANPNPP SSSSSNSNSN TAGNGGDSTN  60
SSAAPQSWYR GNNSSRGQVS RLPNYRRERE RGSETQELGP LREGSTNKNG RVLKDSSLPQ  120
LVQEIQEKLM KGAVECMICY DMVRRSAPVW SCSSCYSIFH LNCIKKWARA PTSVDLSVDK  180
NQGVNWRCPG CQSVQLTSSK EIRYVCFCGK RADPPSDLYL TPHSCGEPCG KPLERDVVGP  240
GWSKEDLCPH VCVLQCHPGP CPPCKAFAPP RICPCGKKTI TTRCSDRKSV LTCGQRCDKV  300
LSCGRHRCER ICHVGPCDQC QVLVNASCFC KKTVEAVLCA DMTVKGEVKA EDGVFSCNSL  360
CGKKLNCGNH FCGEICHPGS CGECGLLPSK TKTCHCGKTI LEKERQSCLD LIPTCSQICQ  420
KLLPCGKHYC EEVCHAGHCP PCLVKVTQKC RCTSTSRNVE CYKTTSDEKF TCDKACGRKK  480
SCGRHRCSER CCPLSNSSNN FSGDWDPHFC SMSCGKKQRC GQHSCESLCH SGHCPPCLET  540
IFTDLTCACG RTSIPPPLPC GTPPPPCQLP CSVPQPCGHS SSHSCHFGDC PPCSVPVAKE  600
CIGGHVVLRN IPCGSRDIRC NKLCGKTRQC GMHACGRTCH PPPCDGHTES EPGLRSSCGQ  660
TCGAPRRDCR HTCIAPCHPS SLCPDVRCDF PVSITCSCGR ITATVPCDAG GSNGSYNADT  720
LYEASVIQKL PVPLQPVEAS TPGKKIPLGQ RKLMCDDECA KLERKRVLAD AFDIAPPNLD  780
ALHFGESSAV SELLGDLYRR DPKWVISVEE RCKYLVLGKS RGTTSGLKVH VFCPMLKDKR  840
DAVRVIAERW KLAVNAAGWE PKRFIVVHVT SKSKVPPRVL GVKGTTTASA PQPPAFDPLV  900
DMDPRLVVSF PDLPRDADIS ALVLRFGGEC ELVWLNDKNA LAVFHDPARA ATAMRRLDHG  960
SVYHGAVATA GASGSSSGTN AWGGAGIAKS NPWKKAVVQE DTWGGEEWSS GGSADVQASA  1020
WKKEAPLAAS LNRWSILDRE SALSSSTSAG IKDLSKGAAV GSLSSLESNA SAQSPAGPYF  1080
GNVTETETTE VVDDWEKAYD TMAEDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein