PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60635.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HB-other

Protein Properties

Length: 1756aa MW: 198043 Da PI: 5.1218

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.3	2.7e-18	35	90	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps++ r+eL++klgL++rq ++WF+ rR k+kk PON60635.1 35 PKRQMKTPFQLETLEKAYALEAYPSESIRAELSEKLGLSDRQLQMWFCHRRLKDKK 90 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1756 aa Download sequence
MEAVSEEENQ NKIDNSNTNN GNNKINSSNE GQSKPKRQMK TPFQLETLEK AYALEAYPSE 60 SIRAELSEKL GLSDRQLQMW FCHRRLKDKK EGGPAKKQRK MVAVLPESPI DELRAGAEPG 120 SDYGSGSGSG SSPFGPAAEL RNVVSRSSLG DDMPPMGRRY YERHSKMELR AIAIVEAQLG 180 EPLRDDGPVL GIEFDSLPPD AFGAPIVAEQ KRSGHRFDGK SYDRHDAKSN KATPRALHEY 240 PFLPDPSITR NDLYGQVAHN SAIDGSTVRS PSFAVGNEQL PRSQGHVSRV RHSSGQDKQG 300 VAFPSPSIDD TSLPQKDSFT NIRVNPPISE HPIISPENPY MLPDGQIFPN DSTLRMERKR 360 KNEEARIAKE VEAHEMRIRK ELEKQENLRR KHEERLRKEM ERQDRERRKE EERLMREKQR 420 EEERSKREQR REMERREKFL QKESLRAEKK KQKEELRKER EAVRRKVALE KATARRIARE 480 SMELIEDEQL ELMEMAAARK GLSSIISLDH DTLQSLESLR DFLVAFPPKS VRLKRPFAIQ 540 PWTNSEKNIG NLLMVWRFLI TFADVLGLWP FTLDEFVQAF HDYDSRLLGE IHVALLKLII 600 KDIEDVARTP SSGLGMNQNG AANPGGGHPE IVEGAYTWGF DIRNWQRHLN PLTWPEIFRQ 660 LALSAGFGPQ LKKRSIAWSY LPDNDEGKSC QDVISTLRSG SAAENAFAIM QEKGLLLPRR 720 SRHRLTPGTV KFAAFHVLSL EGSKGLTVLE LADKIQKSGL RDLTTSRTPE ASISVALTRD 780 AKLFERIAPS TYRVRAAYRK DPADAEAILS AARKKVQVFE NGFLAVEDAD EVERDEDSEC 840 DDVDEDPEVD DLATPSSANI VTEDYNDLNT CSGSGKENLC NDVALNLQNE FDKDSLSVPL 900 SSSKDAKCLS ATPERFVASE NTRASTSDEE NMEIDESKSG ESWIHGLTEG EYSDLSVEER 960 IDALVALIGV ANEGNSIRVV LEDRLEAANA LKKQMWAEAQ LEKGRFKEEN IVKLDFPPLV 1020 GGKTEMHLAR SAAEGSQSPL PDIDNKNTDI SPNVAENQKP VYDLNIVHND LNSLPAEKTS 1080 VAQDFSTGPD NFLSQQLAFA SKRSRSQLKS YIAHRAEEMY VYRSLPLGQD RRRNRYWQFV 1140 ASTSSNDPGS GRIFVELQDG NWRLIDTEEA FDALLMSLDT RGIRESHLRL MLQKIETSFK 1200 ENVRRSMKYS SITGRGVTVV KCETDGMKYS PDFPASFDSP GSIVSGVNSD PDMVETSSSF 1260 RIELGRSETE KKAALRRYQD FQKWMWKECF NSSALRAMKY GKKRAAQLLD TCDFCLSSYY 1320 FEDSHCVSCH QTFHATGNDL EFSQHIIQCK EKRKSDPGNI HVLDSSLPLG SRLLKALLAV 1380 IEISVPSEAL QSFWTLDHRM TWGVKLNASL SSEQLLQILT LFESVMKRDF LLSNFASTDE 1440 LLGSCNQSDN RLRDYSGPGS VSILPWIPLT SSAVALRLYE FDASITYLPE EKPEPTDDKE 1500 FGEYMKLPTR FAPQRNDKEI EVTELDYNEH MREENRSQKS VRNSYKRGRG GREQGRGKKL 1560 HKRANGSKPA AARRNSRVSD NVHQGLRQPG GKILKQGGGR GRRTVRKRRP GNKVVKDMVQ 1620 VHMADTHSSP ESEGESPRNF GEEWDDEKVD MDHMKDDDNI IGEEAVESDD NAQEEEYEQG 1680 NWEVGYNGVS SEWNGGLMEV SDDDADAFED DDNGVEEVGE EDSEGDVDLS EGSDEMPNRI 1740 ENDEGSDLSA SEDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1756 aa Download sequence

MEAVSEEENQ NKIDNSNTNN GNNKINSSNE GQSKPKRQMK TPFQLETLEK AYALEAYPSE  60
SIRAELSEKL GLSDRQLQMW FCHRRLKDKK EGGPAKKQRK MVAVLPESPI DELRAGAEPG  120
SDYGSGSGSG SSPFGPAAEL RNVVSRSSLG DDMPPMGRRY YERHSKMELR AIAIVEAQLG  180
EPLRDDGPVL GIEFDSLPPD AFGAPIVAEQ KRSGHRFDGK SYDRHDAKSN KATPRALHEY  240
PFLPDPSITR NDLYGQVAHN SAIDGSTVRS PSFAVGNEQL PRSQGHVSRV RHSSGQDKQG  300
VAFPSPSIDD TSLPQKDSFT NIRVNPPISE HPIISPENPY MLPDGQIFPN DSTLRMERKR  360
KNEEARIAKE VEAHEMRIRK ELEKQENLRR KHEERLRKEM ERQDRERRKE EERLMREKQR  420
EEERSKREQR REMERREKFL QKESLRAEKK KQKEELRKER EAVRRKVALE KATARRIARE  480
SMELIEDEQL ELMEMAAARK GLSSIISLDH DTLQSLESLR DFLVAFPPKS VRLKRPFAIQ  540
PWTNSEKNIG NLLMVWRFLI TFADVLGLWP FTLDEFVQAF HDYDSRLLGE IHVALLKLII  600
KDIEDVARTP SSGLGMNQNG AANPGGGHPE IVEGAYTWGF DIRNWQRHLN PLTWPEIFRQ  660
LALSAGFGPQ LKKRSIAWSY LPDNDEGKSC QDVISTLRSG SAAENAFAIM QEKGLLLPRR  720
SRHRLTPGTV KFAAFHVLSL EGSKGLTVLE LADKIQKSGL RDLTTSRTPE ASISVALTRD  780
AKLFERIAPS TYRVRAAYRK DPADAEAILS AARKKVQVFE NGFLAVEDAD EVERDEDSEC  840
DDVDEDPEVD DLATPSSANI VTEDYNDLNT CSGSGKENLC NDVALNLQNE FDKDSLSVPL  900
SSSKDAKCLS ATPERFVASE NTRASTSDEE NMEIDESKSG ESWIHGLTEG EYSDLSVEER  960
IDALVALIGV ANEGNSIRVV LEDRLEAANA LKKQMWAEAQ LEKGRFKEEN IVKLDFPPLV  1020
GGKTEMHLAR SAAEGSQSPL PDIDNKNTDI SPNVAENQKP VYDLNIVHND LNSLPAEKTS  1080
VAQDFSTGPD NFLSQQLAFA SKRSRSQLKS YIAHRAEEMY VYRSLPLGQD RRRNRYWQFV  1140
ASTSSNDPGS GRIFVELQDG NWRLIDTEEA FDALLMSLDT RGIRESHLRL MLQKIETSFK  1200
ENVRRSMKYS SITGRGVTVV KCETDGMKYS PDFPASFDSP GSIVSGVNSD PDMVETSSSF  1260
RIELGRSETE KKAALRRYQD FQKWMWKECF NSSALRAMKY GKKRAAQLLD TCDFCLSSYY  1320
FEDSHCVSCH QTFHATGNDL EFSQHIIQCK EKRKSDPGNI HVLDSSLPLG SRLLKALLAV  1380
IEISVPSEAL QSFWTLDHRM TWGVKLNASL SSEQLLQILT LFESVMKRDF LLSNFASTDE  1440
LLGSCNQSDN RLRDYSGPGS VSILPWIPLT SSAVALRLYE FDASITYLPE EKPEPTDDKE  1500
FGEYMKLPTR FAPQRNDKEI EVTELDYNEH MREENRSQKS VRNSYKRGRG GREQGRGKKL  1560
HKRANGSKPA AARRNSRVSD NVHQGLRQPG GKILKQGGGR GRRTVRKRRP GNKVVKDMVQ  1620
VHMADTHSSP ESEGESPRNF GEEWDDEKVD MDHMKDDDNI IGEEAVESDD NAQEEEYEQG  1680
NWEVGYNGVS SEWNGGLMEV SDDDADAFED DDNGVEEVGE EDSEGDVDLS EGSDEMPNRI  1740
ENDEGSDLSA SEDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	84	91	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein