PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON60527.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family WRKY
Protein Properties Length: 345aa    MW: 39126.3 Da    PI: 5.3933
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON60527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.71.4e-24169229259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDg++WrKYGqK++ ++++pr+Y+rCt++   gC ++k+v++ +e+p +  +tY g+H+++
  PON60527.1 169 DDGFAWRKYGQKVILNAKYPRNYFRCTHKydqGCLATKQVQKMEEEPPMYRTTYYGDHTCR 229
                 8***************************99999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MKPSLYYIEM GFDPSAQENA PSGRRKVIDE LVQGRELANQ LHSLLAKSDQ NDVSSAEDLV  60
SKIMESFTNT LFMLNNRNSN YEAKAAAAAA HDDDDNDDEA FDVVSQVQPA STTSPVDSPC  120
LDGRKSEDSQ ESCRSTSVIS TTSLKDRRGS YKRRKTSHTW KRESPTLIDD GFAWRKYGQK  180
VILNAKYPRN YFRCTHKYDQ GCLATKQVQK MEEEPPMYRT TYYGDHTCRN LLKAPELVLD  240
CTSPTQDSSI LLSFNDANLN LASKQASHPF FSSFQSLKQE FKDDNPIITS HNYQTSSSNY  300
IVSPDHHLTA LIHRSPLESD HIHGDMISEM IMDPFEDDVL QHLEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-44WRKY family protein