PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60412.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 426aa MW: 49399.2 Da PI: 9.082

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.7	2.1e-13	326	402	16	89
EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE....EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 16 lvlpkkfaeehggkkeesktltled.esgrsWevkliy..rkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.se 89 + +p +f+++h++ +s +++l+ + ++W v++ y r++s++ +++GW F +++L+ gD++vF+l+++ ++ PON60412.1 326 MDVPAEFVRRHMKW--SSEMIQLQVhNERKKWPVRCYYksRNSSCTvKKMGEGWGPFSTSKNLQGGDVCVFELISKvNG 402 679******844..6667887774577***777677777777899*******************9986444 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MAEAEQMKML PLFALVMDES AIVEHKLRIP TKSAMIFHEE LSDLATLTVP NSHRPWHVKL 60 EKNGVNGIWL NDGLQEFINY YSIHSGCILQ FVYKRNSVFS VHICDAFGSE IDYPIYGPKI 120 EENNEKDISN DDCRVEIFDS KQPMFHGSFC KQEGDTRDDD HLVENLDVRP PIFHGSSERK 180 ALSGGLKQKY PGISTQIVLN QRERGRVRKQ RRNAVSMDHR GPSDFWYRTR SISRIKEEEE 240 KAQELGNANI SGISKPKENN NKSRPHDLPV KRENNNEMIV PRSFSYDKSR RPVLSTETEK 300 AVRAAFRCNL RNPSFMIIVK TYSIYMDVPA EFVRRHMKWS SEMIQLQVHN ERKKWPVRCY 360 YKSRNSSCTV KKMGEGWGPF STSKNLQGGD VCVFELISKV NGILLRVWIY YASDYEEAPR 420 KHLKAE

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MAEAEQMKML PLFALVMDES AIVEHKLRIP TKSAMIFHEE LSDLATLTVP NSHRPWHVKL  60
EKNGVNGIWL NDGLQEFINY YSIHSGCILQ FVYKRNSVFS VHICDAFGSE IDYPIYGPKI  120
EENNEKDISN DDCRVEIFDS KQPMFHGSFC KQEGDTRDDD HLVENLDVRP PIFHGSSERK  180
ALSGGLKQKY PGISTQIVLN QRERGRVRKQ RRNAVSMDHR GPSDFWYRTR SISRIKEEEE  240
KAQELGNANI SGISKPKENN NKSRPHDLPV KRENNNEMIV PRSFSYDKSR RPVLSTETEK  300
AVRAAFRCNL RNPSFMIIVK TYSIYMDVPA EFVRRHMKWS SEMIQLQVHN ERKKWPVRCY  360
YKSRNSSCTV KKMGEGWGPF STSKNLQGGD VCVFELISKV NGILLRVWIY YASDYEEAPR  420
KHLKAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-18	B3 family protein