PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON60338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | TCP | ||||||||
Protein Properties | Length: 199aa MW: 20824.5 Da PI: 9.098 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 115.4 | 7.6e-36 | 47 | 148 | 7 | 89 |
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg............... 88 + ++hTkv+gR+RRvR++a caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tg++s +a + +a++ssss+s++s++ PON60338.1 47 ASRDRHTKVNGRGRRVRMPAMCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGSGSAPAGPVftSAAASSSSSSAPSASvpcrvqpivavtggs 145 578********************************************************9999965555444444444444444445555555555555 PP TCP 89 ..k 89 PON60338.1 146 gvF 148 550 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MGSEITLHNP STSTGHHLNP DSAAVVPASP AAKTQIAVSR KASSAAASRD RHTKVNGRGR 60 RVRMPAMCAA RIFQLTRELG HRSDGETIEW LLRQAEPSII AATGSGSAPA GPVFTSAAAS 120 SSSSSAPSAS VPCRVQPIVA VTGGSGVFAV ASPPSCRLDL CQPVPVPLEF RHMPFTTLLL 180 QSATTEAEQR QQEEALREH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 1e-28 | TCP family protein |