PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON59831.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 540aa    MW: 58718.6 Da    PI: 5.6665
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON59831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS324.42.3e-991395331374
        GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn...........sseelaalklfs 85 
                 l++lL+++Aea+   +++  la+ +L rl+el+sp++ ++m+Rlaa+fteAL++ l ++  + ++a +   +++++           +++++aa++l++
  PON59831.1 139 LIHLLMAAAEALGGANKSrdLARVILVRLKELVSPNDgTNMERLAAHFTEALQNLLDGTAAGSAHASKHFLNNHHHhhrgdehhhhhQTDVVAAFQLLQ 237
                 689*********876666559***********8887669*****************99766665555444443333456677788888888999999** PP

        GRAS  86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg...skeeleetgerLakfAeelgvpfefn 179
                 ++sP++kf+h+taNqaIleav++++r+Hi+D+di++G+QW++L+qaL sR++gpp  +lRiT++++ ++g   s  +++etg+rL  fA+++g pf+f+
  PON59831.1 238 DMSPYVKFGHFTANQAILEAVAHDRRIHIVDYDIMEGIQWASLMQALVSRKDGPPapHLRITALSRGSAGgrrSIGTVQETGRRLVAFAASIGQPFSFH 336
                 ***************************************************776555*********99989999999********************** PP

        GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe........adhnsesFlerflealeyysalfds 270
                     ++ e++++ +L++ +gEal+ n++l+l ++ ++s ++     ++L+  kslsP+++++ve+e        a+ +++ F++rf++ l+ ysa++ds
  PON59831.1 337 QCRLDSDEAFRPAALKLVKGEALVMNCMLNLPHFSHRSPESVV---SFLSGSKSLSPRLITLVEEEaspapattAQGGEGAFVARFMDLLHQYSAVYDS 432
                 *9999*****************************977666665...9*******************55554433333556******************* PP

        GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLv 368
                 lea++p +s++r+ vEr++lg++i+  +    ++   r e+ ++W e+l +a F++ p+s+ + +qaklll  ++ dgyrv+e  s+ lvlgWk+r L+
  PON59831.1 433 LEAGFPMQSRARALVERVFLGPRISGSLGRVYRA---RGEESSSWGEWLAAARFRASPVSSANICQAKLLLGLFN-DGYRVKELaSNRLVLGWKSRHLL 527
                 ****************************999998...888899********************************.******876999*********** PP

        GRAS 369 svSaWr 374
                 s+S W+
  PON59831.1 528 SASLWT 533
                 *****6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    
MTDLAISSTM AMAMDIDMDM IDDAFELDLS GYSTTTTTTT TTTTNTTSPE DDHGCAWNLW  60
SPVVDWNVLT GGHDNFHELI ESMMDDDDDD DGELNSAHKG DNSSNGGCNG SSTPPTEAVD  120
DEYSAGGDGV VDEDKGLRLI HLLMAAAEAL GGANKSRDLA RVILVRLKEL VSPNDGTNME  180
RLAAHFTEAL QNLLDGTAAG SAHASKHFLN NHHHHHRGDE HHHHHQTDVV AAFQLLQDMS  240
PYVKFGHFTA NQAILEAVAH DRRIHIVDYD IMEGIQWASL MQALVSRKDG PPAPHLRITA  300
LSRGSAGGRR SIGTVQETGR RLVAFAASIG QPFSFHQCRL DSDEAFRPAA LKLVKGEALV  360
MNCMLNLPHF SHRSPESVVS FLSGSKSLSP RLITLVEEEA SPAPATTAQG GEGAFVARFM  420
DLLHQYSAVY DSLEAGFPMQ SRARALVERV FLGPRISGSL GRVYRARGEE SSSWGEWLAA  480
ARFRASPVSS ANICQAKLLL GLFNDGYRVK ELASNRLVLG WKSRHLLSAS LWTSPSDSDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-143GRAS family protein