PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON59641.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 355aa    MW: 40682.8 Da    PI: 4.5869
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON59641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.8e-12189232654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PON59641.1 189 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 232
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MELNEHGFLE ELLALRRDTW EAIPTEMNEL FSNTELGLDY YFDQNPSTIF PNSCSSQEMI  60
SPQLEQSFNY NNNHHHNNYS FNEFYYPLSS ELLAPQFTST DSSYNTTTTT ATTQLDTPTF  120
NPIQEDFSLT RLEEEELGIL GDEIHILETQ ASCKMEPVHS PEIPVFNMGL PLETKNRAKK  180
LQGQPSKNLM AERRRRKRLN DRLSMLRSIV PKISKMDRTS ILGDTIDYMK ELLERINNLQ  240
QEIEASSTHV NEMSLFKDVK PNEVLVRNSP KFDVERRNVD TRIEICCAGK PGLLFSTVTT  300
LEALGLEIEQ CVISCFNDFA MQASCSEDLE KRALINSEDI KQALFRNAGY GGRCM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192199ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.19e-85bHLH family protein