PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON59587.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 304aa    MW: 32634 Da    PI: 6.4288
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON59587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.12.1e-17215251135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cgt++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  PON59587.1 215 CTHCGTSSksTPMMRRGPSGPRSLCNACGLFWANRGT 251
                 *********************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MYGHAHPMTM TNQIATADDD DGASPVAGAE SVDNPHIHHY DGHALDDTAG GVPAGAGGVV  60
EDVNPDAVYD AAAGYDLVVQ RIDGSSQLTL SFRGQVYVFD AVTPDKVQAV LLLLGGCEIS  120
AGAQGVGMPS QNHRAMVDLP VRCSQPHRAA SLSRFRQKRK ERCFDKKVRY SVRQEVALRM  180
QRNKGQFTSK KSDGTYSWGN GQDSGPDDNP LETSCTHCGT SSKSTPMMRR GPSGPRSLCN  240
ACGLFWANRG TLRDLSKKTQ DHSQTPVEQN EGEASDSNCE TTMRTHSNLA TFSNGDGSAL  300
MAEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.22e-90GATA family protein