PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON59462.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | LBD | ||||||||
Protein Properties | Length: 276aa MW: 31401.2 Da PI: 6.8299 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 130.5 | 6.9e-41 | 10 | 109 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkC+kdC+lap fpa+qp+kf+++h+lFG++n+ ++lk++++++++dam+s+++e+ +rar Pv+G++g+i++lq qleq+ +el l+++ PON59462.1 10 ACAACKYQRRKCSKDCTLAPFFPADQPEKFQYAHRLFGVRNINNILKQVSPQHKQDAMTSIIFESAMRARFPVHGCLGIIKQLQTQLEQHLEELRLVHK 108 7**********************************************************************************************9998 PP DUF260 100 e 100 + PON59462.1 109 S 109 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MTIKGGTSQA CAACKYQRRK CSKDCTLAPF FPADQPEKFQ YAHRLFGVRN INNILKQVSP 60 QHKQDAMTSI IFESAMRARF PVHGCLGIIK QLQTQLEQHL EELRLVHKSL AICKDQYQQQ 120 QIQCSSNDDV PIQQYIHHQF NSASLPMFSN YESLPVFSNH GSLTEGINNS IYISGDQGHH 180 EYFAKPITIQ NPSSNDVEPA LQQTLFASQL QYPSQQEVDV SYYGDIPFGT MADDRQSFIE 240 SKEHCESSAE SSLKKAIQMK NEHSSTERHQ KNEPKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47870.1 | 1e-37 | LBD family protein |