PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON59209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 455aa MW: 50255.9 Da PI: 6.0406 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00038 | 25 | 47 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk Fs+ L H r H PON59209.1 25 HVCTICGKGFSSGKALGGHKRFH 47 79**************9999988 PP | |||||||
2 | zf-C2H2 | 15.3 | 5.7e-05 | 87 | 107 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk F++ L H+r+H PON59209.1 87 CCVCGKDFPSTKALSGHMRSH 107 99******************9 PP | |||||||
3 | zf-C2H2 | 14.3 | 0.00012 | 314 | 336 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+ksFs+ L H +tH PON59209.1 314 YKCSSCDKSFSTFQALGGHRSTH 336 9***************9999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence |
MEKEEQVFIN GGSSYLEVND PLLTHVCTIC GKGFSSGKAL GGHKRFHIQT ERRAAASTPD 60 ECINGHFKTM KAKNPNMKDA ATNENLCCVC GKDFPSTKAL SGHMRSHPER EWRGIQPPMM 120 LASERISCSH DAQKPKSDDD DDAADDDDDD DDEGEADDDY DHDINKTMST AAITAVDLSE 180 IIPPSWSKTD RRGRTVNPAV AAADGLLNLS RSGDLWLLKK KKKLKVRAVS EKGTLLRFST 240 TTTTCGIDTC NSEEKHVLFN DQPCDVRAMK KKKIKYCSEE KKRKSASVSG SIESDQENVS 300 NKKVSTSTTT TNLYKCSSCD KSFSTFQALG GHRSTHNKDN YKKSSTTSKK EFQVVETVYS 360 KLTNICGEIE DKKFSNATTA EDSEMHHVRS HDVTLPTELA DPSMTMTDDD QIASSSEVDL 420 LGGNRCTTKA TTRRVLEFDL NELPNCVMVG NEEQS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 218 | 224 | LKKKKKL |
2 | 270 | 284 | KKKKIKYCSEEKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56200.1 | 2e-17 | C2H2 family protein |