PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON59004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 295aa MW: 33033.8 Da PI: 5.9855 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 7.8e-17 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl PON59004.1 9 KGPWTEQEDFKLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 56 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.3 | 3.1e-17 | 62 | 107 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ PON59004.1 62 RGKMTPQEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 107 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MVLQEEIRKG PWTEQEDFKL VCFVGLFGDR RWDFIAKVSG LNRTGKSCRL RWVNYLHPGL 60 KRGKMTPQEE RLVLELHSKW GNRWSRIARK LPGRTDNEIK NYWRTHMRKK AQEKKRSSSS 120 SPSPPSSSSA AVSSPSQSSS SSNITTVEVL PFQDSTTGVE SFYDTGGLVV SGDHNEVKGE 180 AEEKKHEDHE QGCYSMDDIW KEISLPEVND IGQFCGQQGG YNCADLVSCP LIEAAAPPSP 240 AVWDQYYCSD SLWKNNILDE VTETFFSSPT ATTAIIDNQF NSAARFEYGG ASLTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 4e-78 | MYB family protein |