PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON58342.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HSF
Protein Properties Length: 331aa    MW: 36212.2 Da    PI: 4.4278
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON58342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1154.7e-36291202102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+++++li w+++g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ Fk+g+kell++i+
    PON58342.1  29 FLTKTYQLVDDPAVDDLIAWNDDGSAFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFKRGEKELLRDIQ 116
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    PON58342.1 117 RRKI 120
                   *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MAPLPVEQTG ESGHSGGGGD SQRTLPTPFL TKTYQLVDDP AVDDLIAWND DGSAFIVWRP  60
AEFARDLLPK YFKHNNFSSF VRQLNTYGFR KVVPDRWEFA NDCFKRGEKE LLRDIQRRKI  120
SPAGAAAAVT VAAAPVAGLV SPSNSGDEQV ISSNSSPVAA PVAAALHRTT SCTTAPELFE  180
ENERLRRENS QLSNELTQLR GLCNNILTLM TSFASSQIDA GGGGRVPEGR PLEFMQVLED  240
SAVIGGATAG PNPEAVEEED EDAEMRPRLF GVSIGVKRVR RDEEEEAMEE EQGQNQLQPV  300
VRELGYPVKS EPPDTNSSER NQDPSWLELG K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.12e-89HSF family protein