PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON57822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | LBD | ||||||||
Protein Properties | Length: 164aa MW: 18842.3 Da PI: 7.4733 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 124.9 | 3.9e-39 | 5 | 105 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C++dC+++pyfp+++p++fa+vh+++Gasnv k+l+++p + r +a++s+ +eA++r++dPvyG+v++i++l++q++++++ela++++ PON57822.1 5 RCAACKYLRRRCPSDCIFSPYFPSNNPQRFACVHRIYGASNVGKMLQQVPGQLRAQAADSMHFEAQCRMEDPVYGCVKIINELHRQIHNAETELAKTRA 103 6***********************************************************************************************998 PP DUF260 100 el 101 ++ PON57822.1 104 QI 105 85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MISGRCAACK YLRRRCPSDC IFSPYFPSNN PQRFACVHRI YGASNVGKML QQVPGQLRAQ 60 AADSMHFEAQ CRMEDPVYGC VKIINELHRQ IHNAETELAK TRAQIAFMIS STNITQQTHH 120 DQLHDDVKFN FNLDNYFLQE QSTNIIDQSS HCPSTQPAPW FVYD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 1e-54 | LBD family protein |