PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57609.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family HB-other
Protein Properties Length: 346aa    MW: 39340.9 Da    PI: 4.3477
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox17.47.6e-062993242752
                 HHHHHHHHHHCTS-HHHHHHHHHHHH CS
    Homeobox  27 aeereeLAkklgLterqVkvWFqNrR 52 
                 +ee+ +L++++gL ++q+ +WF N +
  PON57609.1 299 EEEKMKLSEETGLHQKQINNWFVNSK 324
                 68999*******************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MEEYYHLYRN INIISSLSST HDVISYCSNI IDDDQADTAD DQHVKATSST ATTFHHDHHD  60
GHENKMKNTD GALEDLAAKI FGQDYILKSN ITSHPAFPHL LDASIQCQKV GAPPEKASLL  120
EEIIGRENHI MNIDLTTTSA SNSTTGWSTS QLLRADPELD RFMESFSEIL QRFKEELSMT  180
FNETTTFLSD MSPDSAIFVK PSCILFIDML SDEGENNLKR EMSMFRTVDI DYNIEELTGA  240
KSGEQDLKEM LMRKYNGQSE IDECDWSVYT TFLIIISTPY DMTRLTNIVF LIIQESFIEE  300
EKMKLSEETG LHQKQINNWF VNSKGSDTGN PLQISSLLSR MEGSNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70510.17e-31TALE family protein