PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57469.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 282aa    MW: 31797.8 Da    PI: 9.0786
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.8e-11103151555
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 h e+Er+RR+++   ++ Lr+l+P       ++K s ++   +A +YIk+Lq
  PON57469.1 103 HREIERQRRQEMSALYASLRSLIPLqY---LKGKRSMSDQMHEAAKYIKDLQ 151
                 99***********************66...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDYIPSSMFQ LFDQTSTDDL LQMISTFPRK LDPKHEIQLE DHDQVPPPTP SQVGHGHPPH  60
KLNSGRRSRS SSVADHGKNQ DDDDDDHDEN PNDKKKKKKM IIHREIERQR RQEMSALYAS  120
LRSLIPLQYL KGKRSMSDQM HEAAKYIKDL QRKNQELSTK RDNLRRLSNS SSSASSCNTS  180
TDIIGSDQNS KRHNKNLEPT KISMTHCKAG SVEVLVNTAF GEGLSLARVV GVLTGEGFNV  240
VRCISAKVNG RYLHTIESEA VSGEIKSMDL PELEKKLKNL IV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.13e-23bHLH family protein