PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57152.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HB-other

Protein Properties

Length: 998aa MW: 110603 Da PI: 9.8432

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19	2.4e-06	65	121	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + ++s++e +e+++ g+t +qV+ +F +R++ ++ PON57152.1 65 KRPRDLLNPKAVKYMQSVFSIKDTVSKKESREISALYGVTVTQVREFFASQRTRVRR 121 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 998 aa Download sequence
MKVLKELQIG SSAESLHKSL DSQRELFHSQ IDQLQRIVVT QCKLTGANPL SQEMAAGALS 60 VKIGKRPRDL LNPKAVKYMQ SVFSIKDTVS KKESREISAL YGVTVTQVRE FFASQRTRVR 120 RLVRSSREKS TRTIQCRELP DGAPTSSNTL LPIDPVPLNT IGPTTVEQTP SCSTNDYVLA 180 GIDDLDKQFV ENIFGLMRKE ETFTGQVKLM EWILRIQNSA VLSWFLGKGG MMILATWLSQ 240 AAIEEQTSVL LVVLNVLCHL PLHKALPVHM SAILQSVNRL RFYRTSDISN RARVLLSKWS 300 KLLARSQAMK KPNGVKSSSN VQQHLSDVIG DDSWQSSVDT PENILEIPEN FRKSEPIQSL 360 KLLPASSDDS NKKNILGLSS SQFRERRKVQ LVEQPGQRAA GRSPQATRAA PLNQGRPMSA 420 DDIQKAKMRA QFMQSKYGRA NSSSENKEVK TEGLNKPSTS QVSTLSTASK VLVRHNLEEH 480 KKPTTLPLKV PNTTEASLGL KPIIDLEESL REKCRRVQIS WQTPPEVKLN NQWRVGAGEN 540 SKEVEFQKNR NRREKETIYQ LLQEIPLNPK EPWDREMDYD DTLTLEIPTE QLPDADSGGG 600 AAETQVAPNH GVNNDVAQDA ASQRANGSVL LAPVTSQTGN ASTAEPDLEL LAVLLKNPEL 660 VFALTSGQAA NLSSEETVKL LDMIKAGDTS SNNGLNRQVE EKVEVSLPSP TPSSNPGTSG 720 WRPEAVRNPF SRVPLPNRLA DNPPAVAATR SVLPVQMSTA HVAPAVPPYS LPQVTSMVPE 780 KYTSLGSSLH QIPLTSPSSV QTDLPPATGP LYNLHAQAAS SLRLETATNI TPPAPMSNNT 840 FNIEERRHVS FSPTPLPVPS QLQMHQHLLH QQQQFFSEPS LSTPAYSKQI GKPSHEPDSW 900 RPRQSLPSSN YNPLLNQNNG YNHASVGGSD YVEEGEFESW SPNNSPSRNP EYGSGRSFAE 960 PRMNAGRGYR PDQSRVRSSP GYRDLNRHGN RRWRDRRR

Sequence ? help Back to Top

Protein Sequence Length: 998 aa Download sequence

MKVLKELQIG SSAESLHKSL DSQRELFHSQ IDQLQRIVVT QCKLTGANPL SQEMAAGALS  60
VKIGKRPRDL LNPKAVKYMQ SVFSIKDTVS KKESREISAL YGVTVTQVRE FFASQRTRVR  120
RLVRSSREKS TRTIQCRELP DGAPTSSNTL LPIDPVPLNT IGPTTVEQTP SCSTNDYVLA  180
GIDDLDKQFV ENIFGLMRKE ETFTGQVKLM EWILRIQNSA VLSWFLGKGG MMILATWLSQ  240
AAIEEQTSVL LVVLNVLCHL PLHKALPVHM SAILQSVNRL RFYRTSDISN RARVLLSKWS  300
KLLARSQAMK KPNGVKSSSN VQQHLSDVIG DDSWQSSVDT PENILEIPEN FRKSEPIQSL  360
KLLPASSDDS NKKNILGLSS SQFRERRKVQ LVEQPGQRAA GRSPQATRAA PLNQGRPMSA  420
DDIQKAKMRA QFMQSKYGRA NSSSENKEVK TEGLNKPSTS QVSTLSTASK VLVRHNLEEH  480
KKPTTLPLKV PNTTEASLGL KPIIDLEESL REKCRRVQIS WQTPPEVKLN NQWRVGAGEN  540
SKEVEFQKNR NRREKETIYQ LLQEIPLNPK EPWDREMDYD DTLTLEIPTE QLPDADSGGG  600
AAETQVAPNH GVNNDVAQDA ASQRANGSVL LAPVTSQTGN ASTAEPDLEL LAVLLKNPEL  660
VFALTSGQAA NLSSEETVKL LDMIKAGDTS SNNGLNRQVE EKVEVSLPSP TPSSNPGTSG  720
WRPEAVRNPF SRVPLPNRLA DNPPAVAATR SVLPVQMSTA HVAPAVPPYS LPQVTSMVPE  780
KYTSLGSSLH QIPLTSPSSV QTDLPPATGP LYNLHAQAAS SLRLETATNI TPPAPMSNNT  840
FNIEERRHVS FSPTPLPVPS QLQMHQHLLH QQQQFFSEPS LSTPAYSKQI GKPSHEPDSW  900
RPRQSLPSSN YNPLLNQNNG YNHASVGGSD YVEEGEFESW SPNNSPSRNP EYGSGRSFAE  960
PRMNAGRGYR PDQSRVRSSP GYRDLNRHGN RRWRDRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein