PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON56699.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 486aa MW: 54420.4 Da PI: 5.0467

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON56699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	3e-12	289	335	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er RR+++ ++++ L+ l+P++ +K + a+++ A+eYI++L PON56699.1 289 TKHFASERHRREQMSDKYQVLKNLVPNP-----TKSDRASVVGDAIEYIREL 335 78************************.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MYVDDGSSGS FDPKNTPEAA AAASEDGFNS QLAPPPPPLP SLNSFSSDEN LRLAAEELPY 60 HQHQHLPHSQ EDAALDMELQ QQLAFNMENS YNIDINSTAQ LVSFDPHQQQ QQQQQQQQQP 120 NWDNQDMAYN NIHRHQLQEP ADLLNLFHLP RCSHSSSSLL PSSSSITFAN PTPKTANFPS 180 SSLAFLGDVP IGMDNSSSSS VLFDPLLHLN LPPQPPLFKD LFQSLPNGYA FPASASRNGS 240 FFSNGGDIDG EGSGGIYQDE PDGMQFENGV LEFTRERARI DRGRDGRGTK HFASERHRRE 300 QMSDKYQVLK NLVPNPTKSD RASVVGDAIE YIRELRRTVN ELKILVEKKR RGMESNKRQK 360 AEEDNAGEVE NCNIKPDPDQ SYIRSSWLQR KSKDTEVDVR IIDDEVTIKL VQRKKINLLL 420 IASRVLDELQ LDLRHVAGGH VGDTYSFLFN TKIYEGSSLY ASAIASKLIE ILDRQFAAIL 480 PPISSY

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MYVDDGSSGS FDPKNTPEAA AAASEDGFNS QLAPPPPPLP SLNSFSSDEN LRLAAEELPY  60
HQHQHLPHSQ EDAALDMELQ QQLAFNMENS YNIDINSTAQ LVSFDPHQQQ QQQQQQQQQP  120
NWDNQDMAYN NIHRHQLQEP ADLLNLFHLP RCSHSSSSLL PSSSSITFAN PTPKTANFPS  180
SSLAFLGDVP IGMDNSSSSS VLFDPLLHLN LPPQPPLFKD LFQSLPNGYA FPASASRNGS  240
FFSNGGDIDG EGSGGIYQDE PDGMQFENGV LEFTRERARI DRGRDGRGTK HFASERHRRE  300
QMSDKYQVLK NLVPNPTKSD RASVVGDAIE YIRELRRTVN ELKILVEKKR RGMESNKRQK  360
AEEDNAGEVE NCNIKPDPDQ SYIRSSWLQR KSKDTEVDVR IIDDEVTIKL VQRKKINLLL  420
IASRVLDELQ LDLRHVAGGH VGDTYSFLFN TKIYEGSSLY ASAIASKLIE ILDRQFAAIL  480
PPISSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	4e-68	bHLH family protein