PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON56353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | GATA | ||||||||
Protein Properties | Length: 191aa MW: 20992.8 Da PI: 10.0056 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.5 | 2.1e-19 | 84 | 117 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk + PON56353.1 84 CSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKAR 117 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MMDKINGVDH HDQDHDVMDK ISSLNYNHKG SKSSVKWMSS KMRLIQKMSN NNPQKGTTAT 60 TLIIDHNSES HNVISTSTTT VRVCSDCNTT STPLWRSGPR GPKSLCNACG IRQRKARRAM 120 AEAAAAANAN LVVTSATTTT ASYKIKEKKH WSGNLKNKYN SKLLDTSGVF PQDVTEAALL 180 LMELSYGFVD S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56860.1 | 8e-22 | GATA family protein |